Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR3939-201ENST00000582614 106 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC020914.6-201ENST00000594327 272 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 AC024941.1-201ENST00000612250 334 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.37□□□□□ -1.87
SCN1BQ07699 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
SCN1BQ07699 AC103706.2-201ENST00000638080 240 ntBASIC3.37□□□□□ -1.87
SCN1BQ07699 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCN1BQ07699 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCN1BQ07699 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCN1BQ07699 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SCN1BQ07699 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SCN1BQ07699 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SCN1BQ07699 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 RNU6-637P-201ENST00000384050 107 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL136116.1-201ENST00000403591 381 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 MIR1290-201ENST00000408735 78 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.36□□□□□ -1.87
SCN1BQ07699 RPL18P10-201ENST00000425606 538 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL158071.1-201ENST00000430315 461 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AC091862.1-201ENST00000438016 1100 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 Z73417.1-201ENST00000447373 778 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AP000542.1-201ENST00000448473 371 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 MRPS31P2-201ENST00000451581 518 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SCN1BQ07699 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AC020898.1-201ENST00000474167 787 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 RPS3AP50-201ENST00000487064 803 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 RPS27AP13-201ENST00000498403 237 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AC147055.4-201ENST00000504399 745 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 AC093809.1-201ENST00000509155 340 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 SNORD59.2-201ENST00000516873 68 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 RNU6-798P-201ENST00000516912 103 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 NDUFB9P3-201ENST00000521269 501 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 CYCSP29-201ENST00000533731 318 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.36□□□□□ -1.87
SCN1BQ07699 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AL031281.1-201ENST00000604049 488 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 TUSC7.1-201ENST00000610969 165 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 MIR6868-201ENST00000611215 58 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL603758.1-201ENST00000618654 241 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 AL356596.1-201ENST00000624230 379 ntBASIC3.36□□□□□ -1.87
SCN1BQ07699 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SCN1BQ07699 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCN1BQ07699 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.36□□□□□ -1.87
SCN1BQ07699 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
SCN1BQ07699 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 EI24P2-201ENST00000397776 1076 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 RNU6-55P-201ENST00000411092 107 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 RNU6-954P-201ENST00000411355 107 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCN1BQ07699 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC108734.1-201ENST00000439549 399 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.35□□□□□ -1.87
SCN1BQ07699 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN1BQ07699 AC140076.1-201ENST00000449897 361 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.35□□□□□ -1.87
SCN1BQ07699 UBDP1-202ENST00000457888 382 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 AC104685.1-201ENST00000502445 371 ntBASIC3.35□□□□□ -1.87
SCN1BQ07699 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCN1BQ07699 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms