Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP000926.1-201ENST00000479573 241 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC004924.1-201ENST00000480160 781 ntBASIC3.17□□□□□ -1.9
LMO4P61968 RPL7P24-201ENST00000493052 752 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 AC108078.3-201ENST00000502633 489 ntBASIC3.17□□□□□ -1.9
LMO4P61968 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 MTCYBP43-201ENST00000513621 740 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC116347.2-201ENST00000514912 523 ntBASIC3.17□□□□□ -1.9
LMO4P61968 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 ARL2BPP5-201ENST00000523141 481 ntBASIC3.17□□□□□ -1.9
LMO4P61968 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 AC092470.1-201ENST00000546187 132 ntBASIC3.17□□□□□ -1.9
LMO4P61968 LSM6P2-201ENST00000552208 177 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO4P61968 RPS3AP4-201ENST00000555161 764 ntBASIC3.17□□□□□ -1.9
LMO4P61968 PCMTD1P2-201ENST00000565017 355 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC093519.1-201ENST00000566109 298 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO4P61968 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO4P61968 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.17□□□□□ -1.9
LMO4P61968 AF250324.2-201ENST00000608299 610 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.17□□□□□ -1.9
LMO4P61968 AC005332.6-201ENST00000613178 446 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC090517.2-201ENST00000614966 680 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AL591424.2-201ENST00000617023 128 ntBASIC3.17□□□□□ -1.9
LMO4P61968 U4.5-201ENST00000617137 123 ntBASIC3.17□□□□□ -1.9
LMO4P61968 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.17□□□□□ -1.9
LMO4P61968 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.17□□□□□ -1.9
LMO4P61968 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LMO4P61968 AL133412.1-201ENST00000380194 2992 ntBASIC3.17□□□□□ -1.9
LMO4P61968 AC107982.1-201ENST00000507171 1300 ntBASIC3.17□□□□□ -1.9
LMO4P61968 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.16□□□□□ -1.9
LMO4P61968 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LMO4P61968 MTND5P26-201ENST00000426018 1752 ntBASIC3.16□□□□□ -1.9
LMO4P61968 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 RNU6-1066P-201ENST00000363573 105 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RNU5F-7P-201ENST00000363696 115 ntBASIC3.16□□□□□ -1.9
LMO4P61968 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 SUGT1P1-201ENST00000379514 476 ntBASIC3.16□□□□□ -1.9
LMO4P61968 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LMO4P61968 Y_RNA.390-201ENST00000383932 102 ntBASIC3.16□□□□□ -1.9
LMO4P61968 SNORD3H-201ENST00000384486 214 ntBASIC3.16□□□□□ -1.9
LMO4P61968 SNORD116-23-201ENST00000384645 92 ntBASIC3.16□□□□□ -1.9
LMO4P61968 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LMO4P61968 MTND4LP20-201ENST00000402379 270 ntBASIC3.16□□□□□ -1.9
LMO4P61968 BTF3P7-201ENST00000407097 488 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RN7SKP56-201ENST00000410513 331 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RPL21P32-201ENST00000419877 477 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AL035423.1-201ENST00000420331 213 ntBASIC3.16□□□□□ -1.9
LMO4P61968 MTCYBP24-201ENST00000420387 1106 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.16□□□□□ -1.9
LMO4P61968 ISCA1P1-201ENST00000426679 387 ntBASIC3.16□□□□□ -1.9
LMO4P61968 MTCO2P19-201ENST00000427513 598 ntBASIC3.16□□□□□ -1.9
LMO4P61968 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 YME1L1P1-201ENST00000429435 297 ntBASIC3.16□□□□□ -1.9
LMO4P61968 KCTD9P3-201ENST00000434597 1169 ntBASIC3.16□□□□□ -1.9
LMO4P61968 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LMO4P61968 EEF1E1P1-201ENST00000446998 430 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 TMED11P-201ENST00000479478 690 ntBASIC3.16□□□□□ -1.9
LMO4P61968 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.16□□□□□ -1.9
LMO4P61968 RPL31P61-201ENST00000496160 376 ntBASIC3.16□□□□□ -1.9
LMO4P61968 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
LMO4P61968 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 TMEM248P1-201ENST00000510579 951 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC005798.1-201ENST00000513715 387 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.16□□□□□ -1.9
LMO4P61968 RN7SKP298-201ENST00000515950 94 ntBASIC3.16□□□□□ -1.9
LMO4P61968 Vault.1-201ENST00000516474 102 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RNU6-506P-201ENST00000516553 94 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AC087276.1-201ENST00000529659 480 ntBASIC3.16□□□□□ -1.9
LMO4P61968 OR4A45P-201ENST00000529954 901 ntBASIC3.16□□□□□ -1.9
LMO4P61968 AP002453.2-201ENST00000533503 320 ntBASIC3.16□□□□□ -1.9
LMO4P61968 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.16□□□□□ -1.9
LMO4P61968 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms