Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 Y_RNA.126-201ENST00000363382 111 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-38P-201ENST00000384085 107 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-1013P-201ENST00000384180 107 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 Y_RNA.530-201ENST00000384587 101 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNA5SP397-201ENST00000391323 118 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 MIR1193-201ENST00000408109 78 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNA5SP296-201ENST00000410523 111 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC079809.1-201ENST00000415468 276 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.12□□□□□ -1.59
ERVFC1P60507 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 CBX3P6-201ENST00000430257 527 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 USP9YP16-201ENST00000430287 407 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 RPL34P6-201ENST00000432390 345 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.12□□□□□ -1.59
ERVFC1P60507 USP9YP23-201ENST00000455085 407 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-333P-201ENST00000459117 107 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-1208P-201ENST00000459588 107 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RPL23AP11-201ENST00000475260 469 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC091868.1-201ENST00000508746 304 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-513P-201ENST00000516104 104 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RNU6-1137P-201ENST00000517073 99 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RPL7P20-201ENST00000520308 745 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.12□□□□□ -1.59
ERVFC1P60507 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 RN7SL802P-201ENST00000577858 299 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 RN7SL290P-201ENST00000578661 300 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 AC105224.1-201ENST00000587055 421 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AL669831.4-202ENST00000590817 238 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.12□□□□□ -1.59
ERVFC1P60507 AC245389.1-201ENST00000605141 529 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 AC244517.12-201ENST00000623581 663 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERVFC1P60507 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERVFC1P60507 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERVFC1P60507 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
ERVFC1P60507 AP004289.2-201ENST00000444413 1457 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 MTND5P33-201ENST00000571250 1450 ntBASIC5.12□□□□□ -1.59
ERVFC1P60507 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERVFC1P60507 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERVFC1P60507 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ERVFC1P60507 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
ERVFC1P60507 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AC104260.2-201ENST00000623551 3497 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 AL161781.1-201ENST00000354277 403 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RN7SKP227-201ENST00000364445 330 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RNU6-522P-201ENST00000364497 107 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RNU6-225P-201ENST00000384613 103 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RNU6-1106P-201ENST00000390845 107 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 ARF4P3-201ENST00000397387 509 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RPL31P52-201ENST00000407532 367 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 MIR548K-201ENST00000408406 116 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RPL17P36-201ENST00000420302 549 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 RPL21P99-201ENST00000480369 423 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.11□□□□□ -1.59
ERVFC1P60507 RNA5SP464-201ENST00000516251 108 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 SUMO2P20-201ENST00000520803 283 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 APOOP3-201ENST00000536787 586 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.11□□□□□ -1.59
ERVFC1P60507 MIR5699-201ENST00000578903 90 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.11□□□□□ -1.59
ERVFC1P60507 AL022099.1-201ENST00000604551 712 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 AL121932.1-201ENST00000605542 214 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 U4.1-201ENST00000620349 87 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
ERVFC1P60507 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 AL442639.1-201ENST00000625030 1899 ntBASIC5.11□□□□□ -1.59
ERVFC1P60507 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
ERVFC1P60507 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERVFC1P60507 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ERVFC1P60507 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ERVFC1P60507 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERVFC1P60507 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.1□□□□□ -1.59
ERVFC1P60507 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ERVFC1P60507 OR1S2-201ENST00000302592 978 ntBASIC5.1□□□□□ -1.59
ERVFC1P60507 AL139276.1-201ENST00000311910 1001 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms