Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 AC023424.2-201ENST00000493479 777 ntBASIC1.9□□□□□ -2.11
CAV3P56539 RNU1-40P-201ENST00000516816 164 ntBASIC1.9□□□□□ -2.11
CAV3P56539 RNU1-97P-201ENST00000516872 164 ntBASIC1.9□□□□□ -2.11
CAV3P56539 RN7SKP234-201ENST00000517173 224 ntBASIC1.9□□□□□ -2.11
CAV3P56539 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.9□□□□□ -2.11
CAV3P56539 OR4R1P-201ENST00000529879 463 ntBASIC1.9□□□□□ -2.11
CAV3P56539 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.9□□□□□ -2.11
CAV3P56539 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.9□□□□□ -2.11
CAV3P56539 AC009063.1-201ENST00000563342 702 ntBASIC1.9□□□□□ -2.11
CAV3P56539 SNORD53-201ENST00000579969 78 ntBASIC1.9□□□□□ -2.11
CAV3P56539 MIR4435-1-201ENST00000582552 80 ntBASIC1.9□□□□□ -2.11
CAV3P56539 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
CAV3P56539 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.9□□□□□ -2.11
CAV3P56539 RNA5SP108-201ENST00000605921 117 ntBASIC1.9□□□□□ -2.11
CAV3P56539 AC009831.4-201ENST00000620744 325 ntBASIC1.9□□□□□ -2.11
CAV3P56539 RPL23AP61-201ENST00000623642 466 ntBASIC1.9□□□□□ -2.11
CAV3P56539 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CAV3P56539 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
CAV3P56539 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CAV3P56539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CAV3P56539 AL157700.1-201ENST00000561973 1432 ntBASIC1.9□□□□□ -2.11
CAV3P56539 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.89□□□□□ -2.11
CAV3P56539 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
CAV3P56539 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CAV3P56539 RNU1-73P-201ENST00000383971 164 ntBASIC1.89□□□□□ -2.11
CAV3P56539 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
CAV3P56539 RNU6-244P-201ENST00000391028 104 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AL445529.1-201ENST00000398713 389 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AL135786.1-201ENST00000415892 214 ntBASIC1.89□□□□□ -2.11
CAV3P56539 BOLA3P4-201ENST00000418151 400 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC005005.2-201ENST00000420779 380 ntBASIC1.89□□□□□ -2.11
CAV3P56539 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.89□□□□□ -2.11
CAV3P56539 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.89□□□□□ -2.11
CAV3P56539 Z93242.1-201ENST00000427102 353 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AL356320.1-201ENST00000429616 163 ntBASIC1.89□□□□□ -2.11
CAV3P56539 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.89□□□□□ -2.11
CAV3P56539 SDR42E1P3-201ENST00000438345 502 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AL157827.1-201ENST00000447622 132 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.89□□□□□ -2.11
CAV3P56539 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
CAV3P56539 RPL23AP49-201ENST00000492925 468 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC110792.2-201ENST00000510278 224 ntBASIC1.89□□□□□ -2.11
CAV3P56539 RNA5SP281-201ENST00000516504 135 ntBASIC1.89□□□□□ -2.11
CAV3P56539 RN7SKP244-201ENST00000516513 307 ntBASIC1.89□□□□□ -2.11
CAV3P56539 RN7SKP82-201ENST00000516786 223 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.89□□□□□ -2.11
CAV3P56539 AC025755.1-201ENST00000521306 278 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC024224.1-201ENST00000538284 609 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC008083.2-201ENST00000546707 476 ntBASIC1.89□□□□□ -2.11
CAV3P56539 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
CAV3P56539 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.89□□□□□ -2.11
CAV3P56539 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CAV3P56539 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.89□□□□□ -2.11
CAV3P56539 AC010149.2-201ENST00000637608 315 ntBASIC1.89□□□□□ -2.11
CAV3P56539 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.89□□□□□ -2.11
CAV3P56539 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CAV3P56539 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CAV3P56539 NACA3P-201ENST00000359690 648 ntBASIC1.88□□□□□ -2.11
CAV3P56539 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.88□□□□□ -2.11
CAV3P56539 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.88□□□□□ -2.11
CAV3P56539 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.88□□□□□ -2.11
CAV3P56539 AC104687.1-201ENST00000485829 412 ntBASIC1.88□□□□□ -2.11
CAV3P56539 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
CAV3P56539 RN7SKP40-201ENST00000517211 242 ntBASIC1.88□□□□□ -2.11
CAV3P56539 RNU4-60P-201ENST00000517239 135 ntBASIC1.88□□□□□ -2.11
CAV3P56539 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 SNRPGP18-201ENST00000553000 214 ntBASIC1.88□□□□□ -2.11
CAV3P56539 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 RPS3AP23-202ENST00000574601 686 ntBASIC1.88□□□□□ -2.11
CAV3P56539 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.88□□□□□ -2.11
CAV3P56539 OR4K7P-201ENST00000580232 945 ntBASIC1.88□□□□□ -2.11
CAV3P56539 AC245128.3-201ENST00000594721 748 ntBASIC1.88□□□□□ -2.11
CAV3P56539 HMGN2P28-201ENST00000606102 262 ntBASIC1.88□□□□□ -2.11
CAV3P56539 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.88□□□□□ -2.11
CAV3P56539 AC090425.2-201ENST00000608818 501 ntBASIC1.88□□□□□ -2.11
CAV3P56539 VN1R74P-201ENST00000613259 503 ntBASIC1.88□□□□□ -2.11
CAV3P56539 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
CAV3P56539 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CAV3P56539 AC015726.3-201ENST00000624501 418 ntBASIC1.88□□□□□ -2.11
CAV3P56539 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CAV3P56539 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
CAV3P56539 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CAV3P56539 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CAV3P56539 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CAV3P56539 AL139276.1-201ENST00000311910 1001 ntBASIC1.87□□□□□ -2.11
CAV3P56539 RNU6-1251P-201ENST00000364502 107 ntBASIC1.87□□□□□ -2.11
CAV3P56539 RNA5SP189-201ENST00000364920 115 ntBASIC1.87□□□□□ -2.11
CAV3P56539 XGY1-201ENST00000381172 446 ntBASIC1.87□□□□□ -2.11
CAV3P56539 BTF3P7-201ENST00000407097 488 ntBASIC1.87□□□□□ -2.11
CAV3P56539 AC105402.1-201ENST00000413336 545 ntBASIC1.87□□□□□ -2.11
CAV3P56539 MORF4L1P6-201ENST00000418771 268 ntBASIC1.87□□□□□ -2.11
CAV3P56539 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.87□□□□□ -2.11
CAV3P56539 RPS6P14-201ENST00000425165 719 ntBASIC1.87□□□□□ -2.11
CAV3P56539 HMGB1P45-201ENST00000435986 653 ntBASIC1.87□□□□□ -2.11
CAV3P56539 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms