Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
COPB1P53618 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPB1P53618 PHKBP1-201ENST00000450951 1951 ntBASIC4.29□□□□□ -1.72
COPB1P53618 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
COPB1P53618 MTND5P28-201ENST00000438005 1594 ntBASIC4.29□□□□□ -1.72
COPB1P53618 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
COPB1P53618 OR4G2P-201ENST00000328113 903 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RNY4P24-201ENST00000362735 96 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RN7SKP226-201ENST00000364912 300 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RNU6-1283P-201ENST00000365314 105 ntBASIC4.29□□□□□ -1.72
COPB1P53618 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPB1P53618 HLFP1-201ENST00000402375 499 ntBASIC4.29□□□□□ -1.72
COPB1P53618 MIR548F1-201ENST00000408667 84 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.29□□□□□ -1.72
COPB1P53618 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.29□□□□□ -1.72
COPB1P53618 HMGB3P23-201ENST00000414981 585 ntBASIC4.29□□□□□ -1.72
COPB1P53618 COX6CP15-201ENST00000426313 211 ntBASIC4.29□□□□□ -1.72
COPB1P53618 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 BX890604.2-201ENST00000427883 474 ntBASIC4.29□□□□□ -1.72
COPB1P53618 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.29□□□□□ -1.72
COPB1P53618 NUTF2P3-201ENST00000448540 384 ntBASIC4.29□□□□□ -1.72
COPB1P53618 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.29□□□□□ -1.72
COPB1P53618 AC239809.1-201ENST00000450470 217 ntBASIC4.29□□□□□ -1.72
COPB1P53618 NDUFS5P3-201ENST00000450668 321 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC098824.1-201ENST00000453565 980 ntBASIC4.29□□□□□ -1.72
COPB1P53618 USP9YP34-201ENST00000453983 808 ntBASIC4.29□□□□□ -1.72
COPB1P53618 TRBV26-201ENST00000456572 344 ntBASIC4.29□□□□□ -1.72
COPB1P53618 OR6K1P-201ENST00000456766 971 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RPS7P7-201ENST00000463499 571 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC017015.1-201ENST00000477387 286 ntBASIC4.29□□□□□ -1.72
COPB1P53618 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.29□□□□□ -1.72
COPB1P53618 AL358832.1-201ENST00000497800 389 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC108941.1-201ENST00000502853 530 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.29□□□□□ -1.72
COPB1P53618 AC091133.4-201ENST00000511142 308 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC005798.1-201ENST00000513715 387 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC108064.1-201ENST00000513791 460 ntBASIC4.29□□□□□ -1.72
COPB1P53618 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COPB1P53618 RN7SKP244-201ENST00000516513 307 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RNU6-1178P-201ENST00000516674 107 ntBASIC4.29□□□□□ -1.72
COPB1P53618 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.29□□□□□ -1.72
COPB1P53618 COX6CP8-201ENST00000522620 226 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.29□□□□□ -1.72
COPB1P53618 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 AC084757.1-201ENST00000559987 490 ntBASIC4.29□□□□□ -1.72
COPB1P53618 HNRNPCP4-201ENST00000571636 900 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC093227.2-201ENST00000589357 285 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
COPB1P53618 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.29□□□□□ -1.72
COPB1P53618 BNIP3P8-201ENST00000597863 560 ntBASIC4.29□□□□□ -1.72
COPB1P53618 AC112191.3-201ENST00000604371 277 ntBASIC4.29□□□□□ -1.72
COPB1P53618 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
COPB1P53618 SEPT14P19-203ENST00000633205 211 ntBASIC4.29□□□□□ -1.72
COPB1P53618 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
COPB1P53618 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COPB1P53618 AC009229.4-201ENST00000623854 1947 ntBASIC4.29□□□□□ -1.72
COPB1P53618 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
COPB1P53618 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPB1P53618 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPB1P53618 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COPB1P53618 RNU6-343P-201ENST00000364709 104 ntBASIC4.28□□□□□ -1.72
COPB1P53618 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 RNU5A-6P-201ENST00000384136 116 ntBASIC4.28□□□□□ -1.72
COPB1P53618 Z97055.1-201ENST00000419730 712 ntBASIC4.28□□□□□ -1.72
COPB1P53618 MRPS10P2-201ENST00000431226 381 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 RPL12P46-201ENST00000436610 195 ntBASIC4.28□□□□□ -1.72
COPB1P53618 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COPB1P53618 RBMX2P4-201ENST00000441256 376 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 AL590365.1-201ENST00000450788 243 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 snoU13.7-201ENST00000459220 104 ntBASIC4.28□□□□□ -1.72
COPB1P53618 snoU109.1-201ENST00000459339 135 ntBASIC4.28□□□□□ -1.72
COPB1P53618 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COPB1P53618 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.28□□□□□ -1.72
COPB1P53618 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 RNU6-506P-201ENST00000516553 94 ntBASIC4.28□□□□□ -1.72
COPB1P53618 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 AP003730.1-201ENST00000524605 285 ntBASIC4.28□□□□□ -1.72
COPB1P53618 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
COPB1P53618 OR5AP1P-201ENST00000529730 940 ntBASIC4.28□□□□□ -1.72
COPB1P53618 YPEL5P3-201ENST00000547227 352 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
COPB1P53618 MIR4504-201ENST00000577413 92 ntBASIC4.28□□□□□ -1.72
COPB1P53618 MIR5186-201ENST00000577504 120 ntBASIC4.28□□□□□ -1.72
COPB1P53618 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.28□□□□□ -1.72
COPB1P53618 MIR3913-1-201ENST00000577744 102 ntBASIC4.28□□□□□ -1.72
COPB1P53618 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms