Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 MTND4P2-201ENST00000507767 1203 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 AC093809.1-201ENST00000509155 340 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC022447.1-201ENST00000515358 464 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 HIGD1AP3-201ENST00000515857 278 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
CLCNKAP51800 PCMTD1P2-201ENST00000565017 355 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 MIR5186-201ENST00000577504 120 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 AC022146.1-201ENST00000595307 847 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 BNIP3P23-201ENST00000599655 511 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCNKAP51800 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 AL009028.1-201ENST00000604895 802 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC005344.1-201ENST00000613391 459 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
CLCNKAP51800 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCNKAP51800 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCNKAP51800 AC092104.1-201ENST00000497346 1441 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCNKAP51800 GDI2P1-201ENST00000429312 1336 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCNKAP51800 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 RNU5F-7P-201ENST00000363696 115 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 SNORA7.2-201ENST00000364446 145 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 SNORA51.2-201ENST00000364595 132 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 RNU6-343P-201ENST00000364709 104 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 SNORD116-4-201ENST00000384733 96 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 MIR607-201ENST00000385241 96 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLCNKAP51800 MTCYBP36-201ENST00000404146 440 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 SNORA11-201ENST00000408789 128 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 RN7SKP156-201ENST00000410308 342 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC109780.2-201ENST00000413467 845 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AL512649.1-201ENST00000428997 581 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC011742.1-201ENST00000431448 434 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC096638.2-201ENST00000434965 711 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 SNRPEP7-201ENST00000438350 220 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCNKAP51800 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 NOTCH2P1-201ENST00000443481 624 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 COX6CP2-201ENST00000444980 225 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 COX6CP12-201ENST00000446748 202 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 ARPC3P5-201ENST00000448802 534 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 NANOGP10-201ENST00000453325 895 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 RPL31P50-201ENST00000471002 296 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC116337.2-201ENST00000477662 156 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC004069.2-201ENST00000505438 1114 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 MTCO3P7-201ENST00000510008 774 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 SAP18P1-201ENST00000512058 390 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC005798.1-201ENST00000513715 387 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 MTND5P4-201ENST00000514978 288 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCNKAP51800 MED28P5-201ENST00000528254 438 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC013828.2-201ENST00000532487 235 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC006362.1-201ENST00000567392 174 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.78□□□□□ -1.8
CLCNKAP51800 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC097468.3-201ENST00000607956 456 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC103591.3-201ENST00000608684 209 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC012360.2-201ENST00000609349 391 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 AC090116.1-201ENST00000615679 446 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCNKAP51800 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AC116096.1-201ENST00000566804 2314 ntBASIC3.78□□□□□ -1.8
CLCNKAP51800 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCNKAP51800 AP004289.2-201ENST00000444413 1457 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms