Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 DPRXP5-201ENST00000604662 539 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC007490.1-201ENST00000624321 703 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC138649.5-201ENST00000637456 137 ntBASIC4.26□□□□□ -1.73
CTCFP49711 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CTCFP49711 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTCFP49711 AC104454.1-201ENST00000421341 1401 ntBASIC4.26□□□□□ -1.73
CTCFP49711 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CTCFP49711 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 AC066616.2-201ENST00000559334 1481 ntBASIC4.25□□□□□ -1.73
CTCFP49711 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTCFP49711 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 RNU6-1122P-201ENST00000384449 107 ntBASIC4.25□□□□□ -1.73
CTCFP49711 RPL23AP29-201ENST00000397284 453 ntBASIC4.25□□□□□ -1.73
CTCFP49711 SNRPEP2-201ENST00000397592 279 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC107081.1-201ENST00000414975 361 ntBASIC4.25□□□□□ -1.73
CTCFP49711 OFD1P18Y-201ENST00000420889 959 ntBASIC4.25□□□□□ -1.73
CTCFP49711 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 AC005517.2-201ENST00000424673 553 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC083863.1-201ENST00000438811 231 ntBASIC4.25□□□□□ -1.73
CTCFP49711 MTCYBP31-201ENST00000438855 1122 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC107083.1-201ENST00000439643 279 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 AC078918.1-201ENST00000498515 228 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 AC109458.1-201ENST00000508858 316 ntBASIC4.25□□□□□ -1.73
CTCFP49711 Y_RNA.673-201ENST00000516306 88 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 IGKV2D-23-201ENST00000518179 286 ntBASIC4.25□□□□□ -1.73
CTCFP49711 IGKV2D-36-201ENST00000518643 226 ntBASIC4.25□□□□□ -1.73
CTCFP49711 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.25□□□□□ -1.73
CTCFP49711 AC103783.1-201ENST00000520506 373 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 UBTFL10-201ENST00000528532 562 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.25□□□□□ -1.73
CTCFP49711 AL512347.1-201ENST00000566420 503 ntBASIC4.25□□□□□ -1.73
CTCFP49711 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTCFP49711 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 NIFKP6-201ENST00000598115 845 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.25□□□□□ -1.73
CTCFP49711 IGHV3-29-201ENST00000604817 344 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AL139344.1-201ENST00000605228 195 ntBASIC4.25□□□□□ -1.73
CTCFP49711 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 AC245297.2-201ENST00000610119 565 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AC009318.4-201ENST00000620496 486 ntBASIC4.25□□□□□ -1.73
CTCFP49711 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 AC019226.2-201ENST00000625973 424 ntBASIC4.25□□□□□ -1.73
CTCFP49711 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 MFSD8-236ENST00000641509 4050 ntBASIC4.25□□□□□ -1.73
CTCFP49711 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.25□□□□□ -1.73
CTCFP49711 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CTCFP49711 MTND5P24-201ENST00000438892 1767 ntBASIC4.25□□□□□ -1.73
CTCFP49711 AL390862.1-201ENST00000635467 1469 ntBASIC4.24□□□□□ -1.73
CTCFP49711 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CTCFP49711 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTCFP49711 SNORA31-201ENST00000362607 130 ntBASIC4.24□□□□□ -1.73
CTCFP49711 RNU6-730P-201ENST00000383954 104 ntBASIC4.24□□□□□ -1.73
CTCFP49711 MIR1284-201ENST00000408337 120 ntBASIC4.24□□□□□ -1.73
CTCFP49711 RHEBP3-201ENST00000411920 351 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.24□□□□□ -1.73
CTCFP49711 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.24□□□□□ -1.73
CTCFP49711 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 AL035410.1-201ENST00000427409 427 ntBASIC4.24□□□□□ -1.73
CTCFP49711 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.24□□□□□ -1.73
CTCFP49711 NARSP2-201ENST00000518524 679 ntBASIC4.24□□□□□ -1.73
CTCFP49711 OR5AK1P-201ENST00000524837 922 ntBASIC4.24□□□□□ -1.73
CTCFP49711 MTND3P12-201ENST00000559068 328 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 MIR4769-201ENST00000584126 77 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AC010928.3-201ENST00000587712 541 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AL031281.1-201ENST00000604049 488 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AC025588.3-201ENST00000604182 274 ntBASIC4.24□□□□□ -1.73
CTCFP49711 MIR486-1-201ENST00000612171 68 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AL354976.1-201ENST00000613843 387 ntBASIC4.24□□□□□ -1.73
CTCFP49711 AP003485.2-201ENST00000623636 610 ntBASIC4.24□□□□□ -1.73
CTCFP49711 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 AL137790.1-201ENST00000634283 177 ntBASIC4.24□□□□□ -1.73
CTCFP49711 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTCFP49711 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTCFP49711 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTCFP49711 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.24□□□□□ -1.73
CTCFP49711 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
CTCFP49711 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTCFP49711 RNU6-931P-201ENST00000363850 107 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms