Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
HOXA11P31270 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HOXA11P31270 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HOXA11P31270 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 AC092447.7-201ENST00000422212 1621 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 AL157700.1-201ENST00000561973 1432 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 SNORA31-201ENST00000362607 130 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 RNU6-216P-201ENST00000363282 104 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HOXA11P31270 RNU6-1151P-201ENST00000384684 107 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 RPL23AP47-201ENST00000408017 460 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 MTCYBP24-201ENST00000420387 1106 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 OR2B8P-201ENST00000432841 938 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 MTND1P28-201ENST00000435623 950 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 MTND4P18-201ENST00000447010 465 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC093392.2-201ENST00000450682 337 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 RPL23AP35-201ENST00000451906 501 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 AP001086.1-201ENST00000494882 321 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 KLRA1P-201ENST00000503499 986 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 HMGN1P11-201ENST00000508668 303 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 TMEM248P1-201ENST00000510579 951 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC027309.2-201ENST00000520566 192 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 MIR3922-201ENST00000585192 84 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXA11P31270 AL357080.1-201ENST00000617394 239 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXA11P31270 AC092650.2-201ENST00000619984 902 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC120349.2-201ENST00000625002 298 ntBASIC4.07□□□□□ -1.76
HOXA11P31270 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXA11P31270 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXA11P31270 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXA11P31270 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA11P31270 PABPC1P7-201ENST00000413177 1513 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA11P31270 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
HOXA11P31270 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA11P31270 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HOXA11P31270 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HOXA11P31270 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA11P31270 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXA11P31270 RPL21P132-201ENST00000331267 462 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RNU6-433P-201ENST00000363216 104 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RNU6-660P-201ENST00000364566 109 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AL133264.1-201ENST00000407157 562 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RNU2-37P-201ENST00000410695 177 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA11P31270 ATP5A1P2-201ENST00000412323 255 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 BOLA3P4-201ENST00000418151 400 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 FNDC3CP-201ENST00000420795 1155 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 EIF1P1-201ENST00000421436 341 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA11P31270 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 YME1L1P1-201ENST00000429435 297 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RPL21P112-201ENST00000434403 463 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 USP9YP35-201ENST00000435696 412 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RBMX2P4-201ENST00000441256 376 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA11P31270 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA11P31270 RPL7P59-201ENST00000447700 943 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 EPS15P1-201ENST00000448836 336 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 PDSS1P2-201ENST00000449397 678 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA11P31270 FGF7P6-202ENST00000451282 293 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 RPL18AP17-201ENST00000455326 198 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA11P31270 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXA11P31270 AC108078.3-201ENST00000502633 489 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXA11P31270 AC093281.2-201ENST00000510153 597 ntBASIC4.06□□□□□ -1.76
HOXA11P31270 NDUFB4P9-201ENST00000511646 388 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms