Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A2P05997 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.65□□□□□ -1.83
COL5A2P05997 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC023050.1-201ENST00000498198 304 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A2P05997 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A2P05997 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A2P05997 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.65□□□□□ -1.83
COL5A2P05997 SNORD53-201ENST00000579969 78 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AC015688.2-201ENST00000584523 262 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AC009237.15-201ENST00000610252 501 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AC008121.2-201ENST00000614647 523 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AC131159.1-201ENST00000621854 213 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AL157770.1-201ENST00000623049 439 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC092608.2-201ENST00000624427 218 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.65□□□□□ -1.83
COL5A2P05997 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
COL5A2P05997 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A2P05997 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A2P05997 ELL2P4-201ENST00000446870 1376 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 AL390862.1-201ENST00000635467 1469 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL5A2P05997 AC007342.7-201ENST00000624610 2337 ntBASIC3.65□□□□□ -1.83
COL5A2P05997 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
COL5A2P05997 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
COL5A2P05997 AL031985.3-201ENST00000565390 2449 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 SNORD56.3-201ENST00000363507 71 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.64□□□□□ -1.83
COL5A2P05997 HMGB1P49-201ENST00000418882 569 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC233981.1-201ENST00000423224 461 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.64□□□□□ -1.83
COL5A2P05997 PTGES3P1-201ENST00000439531 483 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 FGF7P5-201ENST00000441829 291 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.64□□□□□ -1.83
COL5A2P05997 AC239798.3-201ENST00000454459 408 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC092045.1-201ENST00000495716 1231 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC091435.1-201ENST00000505442 584 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 SNORA31.13-201ENST00000516624 135 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AP003122.3-201ENST00000526316 255 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A2P05997 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A2P05997 AL035411.2-201ENST00000604022 421 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AL158042.1-201ENST00000605338 460 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC012557.2-201ENST00000605919 418 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 TUSC7.1-201ENST00000610969 165 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC098679.4-201ENST00000624241 654 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.64□□□□□ -1.83
COL5A2P05997 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 AL445523.1-201ENST00000451184 1362 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
COL5A2P05997 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 AC104454.1-201ENST00000421341 1401 ntBASIC3.64□□□□□ -1.83
COL5A2P05997 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL5A2P05997 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A2P05997 AC093909.5-201ENST00000621839 1799 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL5A2P05997 AL356131.1-201ENST00000405826 414 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A2P05997 AL356320.2-201ENST00000417263 507 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.63□□□□□ -1.83
COL5A2P05997 PTP4A1P5-201ENST00000420305 455 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC011233.1-201ENST00000422812 283 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 CASP3P1-201ENST00000446037 609 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 OR51B8P-201ENST00000449892 769 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC244505.3-201ENST00000454598 187 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 snoU13.26-201ENST00000459452 105 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC003982.1-202ENST00000469928 248 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 RPS3AP22-201ENST00000488297 769 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AC034244.1-201ENST00000507687 207 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL5A2P05997 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC117532.1-201ENST00000514638 323 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 RNA5SP282-201ENST00000516355 108 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 MIR2114-201ENST00000516645 80 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.63□□□□□ -1.83
COL5A2P05997 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.63□□□□□ -1.83
COL5A2P05997 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.63□□□□□ -1.83
COL5A2P05997 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.63□□□□□ -1.83
COL5A2P05997 AP005136.1-201ENST00000579765 429 ntBASIC3.63□□□□□ -1.83
COL5A2P05997 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms