Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.37□□□□□ -1.55
PDGFAP04085 OR4H6P-201ENST00000563771 921 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC073539.2-201ENST00000597113 165 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AC024940.4-201ENST00000605507 246 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 SDR42E1P2-201ENST00000614861 481 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 MIR7155-201ENST00000615925 56 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 AL732372.2-225ENST00000642124 456 ntBASIC5.37□□□□□ -1.55
PDGFAP04085 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
PDGFAP04085 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.37□□□□□ -1.55
PDGFAP04085 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
PDGFAP04085 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDGFAP04085 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 STX3-208ENST00000641815 3236 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 RNU6-1249P-201ENST00000363237 111 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 Y_RNA.428-201ENST00000384078 102 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 Y_RNA.473-201ENST00000384333 102 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 SNORD3H-201ENST00000384486 214 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 RNU6-712P-201ENST00000410558 100 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 HMGB3P2-201ENST00000411913 584 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC114482.1-201ENST00000418010 247 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC008267.5-201ENST00000424928 265 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 RSL24D1P6-201ENST00000426934 401 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC096775.1-201ENST00000437724 448 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC112187.1-201ENST00000455837 479 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 snoU13.3-201ENST00000459441 104 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AC005532.2-201ENST00000467154 373 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AC007686.1-201ENST00000488511 463 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AC009120.1-201ENST00000493458 473 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 MRPS35P2-201ENST00000508242 191 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 RNU6-699P-201ENST00000517081 110 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC010680.4-201ENST00000605334 543 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 AL139099.4-201ENST00000614802 114 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.36□□□□□ -1.55
PDGFAP04085 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.36□□□□□ -1.55
PDGFAP04085 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.36□□□□□ -1.55
PDGFAP04085 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDGFAP04085 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFAP04085 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.36□□□□□ -1.55
PDGFAP04085 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDGFAP04085 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PDGFAP04085 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PDGFAP04085 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PDGFAP04085 SOCS5P3-201ENST00000425115 1576 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 Y_RNA.455-201ENST00000384230 98 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 RNU6-837P-201ENST00000391056 108 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AL590704.1-201ENST00000402856 794 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.35□□□□□ -1.55
PDGFAP04085 AL160275.3-201ENST00000423876 471 ntBASIC5.35□□□□□ -1.55
PDGFAP04085 AC099677.3-201ENST00000427081 395 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms