Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA1P02708 Z99127.3-201ENST00000448158 395 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 AC244505.3-201ENST00000454598 187 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 RPL7P5-201ENST00000471472 736 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 BOLA3P3-201ENST00000505182 232 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 SUMO2P5-201ENST00000506790 245 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 AC026801.2-201ENST00000515352 425 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA1P02708 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 AC018645.2-201ENST00000609151 472 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNA1P02708 RNU6-1192P-201ENST00000612197 107 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 RNU6-489P-201ENST00000618289 107 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 AC007275.1-201ENST00000621243 671 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.39□□□□□ -1.87
CHRNA1P02708 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNA1P02708 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA1P02708 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 MIR22-201ENST00000362190 85 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 RNU6-1066P-201ENST00000363573 105 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 RNU6-1000P-201ENST00000391066 106 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 MTND4LP20-201ENST00000402379 270 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC096533.1-201ENST00000411645 353 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 RPS7P13-201ENST00000413955 498 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 EEF1A1P41-201ENST00000414667 207 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRNA1P02708 MTCO3P12-201ENST00000416718 547 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AL139132.1-201ENST00000431587 344 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA1P02708 HMGN2P13-201ENST00000476476 274 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC008427.1-201ENST00000503102 655 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 DYNLL1P6-201ENST00000503440 264 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.38□□□□□ -1.87
CHRNA1P02708 AP000790.1-201ENST00000528891 737 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AP001317.1-201ENST00000531194 960 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC027807.1-201ENST00000559921 996 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.38□□□□□ -1.87
CHRNA1P02708 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.38□□□□□ -1.87
CHRNA1P02708 AP002802.2-201ENST00000605877 235 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNA1P02708 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 AC026634.1-201ENST00000634369 198 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNA1P02708 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
CHRNA1P02708 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA1P02708 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA1P02708 RNU1-75P-201ENST00000347264 129 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 RNU6-251P-201ENST00000363235 104 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA1P02708 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHRNA1P02708 RNU6-821P-201ENST00000390995 107 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL031121.1-201ENST00000406553 254 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL136133.1-201ENST00000413694 376 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.37□□□□□ -1.87
CHRNA1P02708 MTCO3P1-205ENST00000422088 832 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC006548.1-201ENST00000427470 102 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 HSPE1P28-201ENST00000443139 211 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC093392.2-201ENST00000450682 337 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 NPM1P13-201ENST00000452663 865 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 OR2A20P-203ENST00000498397 1268 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.37□□□□□ -1.87
CHRNA1P02708 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA1P02708 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA1P02708 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
CHRNA1P02708 AC034105.3-201ENST00000565294 442 ntBASIC3.37□□□□□ -1.87
CHRNA1P02708 MTCO3P24-201ENST00000572729 782 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms