Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC026412.2-201ENST00000512270 1075 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.02□□□□□ -1.93
CLDN9O95484 MTCO3P15-201ENST00000526563 574 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 OR4H12P-201ENST00000556269 907 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC090666.1-201ENST00000578241 445 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 FAM60BP-201ENST00000578364 658 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN9O95484 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN9O95484 AL445435.1-201ENST00000604232 665 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 AC107294.3-201ENST00000609211 526 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 AL592148.2-201ENST00000612210 372 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 AC138932.5-201ENST00000617759 563 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 MIR7975-201ENST00000619350 68 ntBASIC3.02□□□□□ -1.93
CLDN9O95484 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN9O95484 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN9O95484 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN9O95484 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN9O95484 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 RNA5SP72-201ENST00000364442 117 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 SUGT1P1-201ENST00000379514 476 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 CYCSP45-201ENST00000402289 315 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 DPRXP1-201ENST00000426312 460 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN9O95484 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 VN1R10P-201ENST00000447106 875 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 ARPC3P2-201ENST00000457786 533 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 snoU109.4-201ENST00000458953 143 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC092757.1-201ENST00000467293 467 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC016550.1-201ENST00000505348 785 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC119751.5-201ENST00000514077 770 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC027309.2-201ENST00000520566 192 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN9O95484 AP001189.2-201ENST00000527320 189 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC018630.1-201ENST00000541376 925 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC011471.1-201ENST00000585766 187 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC008507.2-201ENST00000588402 1176 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN9O95484 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC068831.7-201ENST00000616954 363 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN9O95484 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLDN9O95484 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 MTND5P27-201ENST00000428871 1720 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 Z99496.1-201ENST00000469424 1477 ntBASIC3.01□□□□□ -1.93
CLDN9O95484 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN9O95484 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3□□□□□ -1.93
CLDN9O95484 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3□□□□□ -1.93
CLDN9O95484 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3□□□□□ -1.93
CLDN9O95484 RNU6-707P-201ENST00000364647 95 ntBASIC3□□□□□ -1.93
CLDN9O95484 SNORD51-201ENST00000384320 80 ntBASIC3□□□□□ -1.93
CLDN9O95484 RNU4-47P-201ENST00000410876 114 ntBASIC3□□□□□ -1.93
CLDN9O95484 AC069282.1-201ENST00000411911 526 ntBASIC3□□□□□ -1.93
CLDN9O95484 AL024507.1-201ENST00000412741 274 ntBASIC3□□□□□ -1.93
CLDN9O95484 UBE2D3P2-201ENST00000424409 445 ntBASIC3□□□□□ -1.93
CLDN9O95484 RN7SL863P-201ENST00000462370 296 ntBASIC3□□□□□ -1.93
CLDN9O95484 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
CLDN9O95484 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 OR4G11P-201ENST00000492842 939 ntBASIC3□□□□□ -1.93
CLDN9O95484 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLDN9O95484 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3□□□□□ -1.93
CLDN9O95484 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3□□□□□ -1.93
CLDN9O95484 SNORA31.8-201ENST00000516327 108 ntBASIC3□□□□□ -1.93
CLDN9O95484 AC068339.2-201ENST00000534395 618 ntBASIC3□□□□□ -1.93
CLDN9O95484 AC087897.1-201ENST00000550134 156 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms