Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 RNU6-97P-201ENST00000363387 104 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 RNU6-263P-201ENST00000363811 107 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 RNU6-1279P-201ENST00000383917 103 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 RNU4-6P-201ENST00000410804 122 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC078974.1-201ENST00000411597 223 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 RPS3AP44-201ENST00000425466 790 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 MRPS18BP2-201ENST00000434310 759 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 Z74696.2-201ENST00000436514 498 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC108734.1-201ENST00000439549 399 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 FABP3P2-201ENST00000453169 399 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC104308.1-201ENST00000454621 333 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 RPS20P32-201ENST00000456044 356 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 KLF3P2-201ENST00000465138 268 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 S100A11P1-201ENST00000477525 312 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC021382.1-201ENST00000483523 359 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 PTGES3P3-201ENST00000511479 482 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 RNU6-201P-201ENST00000517100 61 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 MYL12AP1-201ENST00000518490 515 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 DEFB109D-201ENST00000529497 240 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 AC091516.1-201ENST00000549191 703 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 UBE2L4-201ENST00000587688 464 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 VN1R85P-201ENST00000601587 426 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AL359999.1-201ENST00000604513 294 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC090578.1-201ENST00000604955 591 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC098614.4-201ENST00000607601 462 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC008498.1-201ENST00000613012 531 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC013476.2-201ENST00000614456 459 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 AC018755.4-201ENST00000619715 454 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 AL158801.5-201ENST00000623123 465 ntBASIC3.64□□□□□ -1.83
ZIC3O60481 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.64□□□□□ -1.83
ZIC3O60481 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.64□□□□□ -1.83
ZIC3O60481 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 AC092125.1-201ENST00000562568 1995 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC011266.1-201ENST00000624119 3569 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZIC3O60481 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
ZIC3O60481 PNPT1P2-201ENST00000456768 2050 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZIC3O60481 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC027287.1-201ENST00000553115 1453 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZIC3O60481 FRG1BP-201ENST00000278882 761 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 RNU6-1042P-201ENST00000384204 107 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZIC3O60481 SNORA57.1-201ENST00000391227 145 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZIC3O60481 LAP3P1-201ENST00000403648 294 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZIC3O60481 HMGB3P23-201ENST00000414981 585 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.63□□□□□ -1.83
ZIC3O60481 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC104651.1-201ENST00000427559 735 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.63□□□□□ -1.83
ZIC3O60481 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.63□□□□□ -1.83
ZIC3O60481 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.63□□□□□ -1.83
ZIC3O60481 RPL22P17-201ENST00000438729 315 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 PPIAP3-201ENST00000450588 505 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.63□□□□□ -1.83
ZIC3O60481 AP1S2P1-201ENST00000457344 379 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AL672167.3-201ENST00000465951 960 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC138853.1-201ENST00000503549 823 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.63□□□□□ -1.83
ZIC3O60481 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 NDUFB4P2-201ENST00000509515 391 ntBASIC3.63□□□□□ -1.83
ZIC3O60481 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.63□□□□□ -1.83
ZIC3O60481 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms