Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 U6.112-201ENST00000384129 70 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 RPL22P22-201ENST00000395439 379 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 RNU2-21P-201ENST00000410368 188 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 RN7SKP58-201ENST00000411010 305 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC244505.4-201ENST00000434905 287 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 SSXP5-201ENST00000443473 287 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 GXYLT1P1-201ENST00000446657 490 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 OR51B8P-201ENST00000449892 769 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 RPL23AP15-201ENST00000450202 459 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 snoU13.7-201ENST00000459220 104 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC003982.1-202ENST00000469928 248 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC010265.1-201ENST00000513509 211 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 OR5D17P-201ENST00000531492 978 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC013412.1-201ENST00000610687 192 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC006111.3-201ENST00000622137 383 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC092184.1-201ENST00000625042 715 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 AC006927.2-201ENST00000639256 389 ntBASIC3.5□□□□□ -1.85
USP16Q9Y5T5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
USP16Q9Y5T5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC011978.2-201ENST00000569835 2054 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC016716.1-201ENST00000265882 708 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RNA5SP295-201ENST00000362655 121 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 MIR591-201ENST00000385290 95 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL445529.1-201ENST00000398713 389 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RPL31P2-201ENST00000413849 377 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 SDCBPP3-201ENST00000419629 891 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC246680.2-201ENST00000422106 389 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RPS29P6-201ENST00000438196 145 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL513043.1-201ENST00000439124 535 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL050341.1-201ENST00000447743 313 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 CDC42P1-201ENST00000456658 548 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AL049829.1-201ENST00000465411 156 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC026414.1-201ENST00000504046 698 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC112206.4-201ENST00000515142 405 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RNU6-488P-201ENST00000515918 99 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 RN7SKP277-201ENST00000516895 283 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC234778.2-201ENST00000566241 354 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 ZNF861P-201ENST00000588126 639 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC231759.1-201ENST00000616455 597 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC021755.1-201ENST00000559747 1447 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC002546.1-201ENST00000588041 2504 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC092326.2-201ENST00000624772 1561 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC025263.3-201ENST00000622965 1396 ntBASIC3.49□□□□□ -1.85
USP16Q9Y5T5 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 ASNSP3-201ENST00000451989 1306 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC004944.1-201ENST00000517807 3059 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 MYL8P-204ENST00000431574 518 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC004865.1-201ENST00000442276 1003 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 BX276092.4-201ENST00000452056 248 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AP003102.1-201ENST00000525638 661 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 MTND2P26-201ENST00000528255 1029 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC009097.3-201ENST00000563557 1018 ntBASIC3.48□□□□□ -1.85
USP16Q9Y5T5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.48□□□□□ -1.85
USP16Q9Y5T5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms