Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC073464.1-201ENST00000429823 534 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL121877.1-201ENST00000453704 622 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 Z82190.1-201ENST00000454534 490 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MTCO3P20-201ENST00000454926 688 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC099563.1-201ENST00000456086 418 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC108022.1-201ENST00000493466 478 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC112204.1-201ENST00000502591 103 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC019235.1-201ENST00000503847 207 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC110792.2-201ENST00000510278 224 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC018797.3-201ENST00000513388 1241 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP519-201ENST00000516480 119 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 SNORA20.3-201ENST00000516880 132 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL352979.3-201ENST00000553515 247 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RPL21P5-201ENST00000554662 472 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MIR5186-201ENST00000577504 120 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MIR3682-201ENST00000581338 84 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 LLPHP1-201ENST00000603571 367 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC112230.1-201ENST00000604342 547 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL390208.1-201ENST00000605885 644 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MIR492-201ENST00000638676 116 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 OR11H4-201ENST00000315409 1082 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RNU1-14P-201ENST00000362759 152 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RNA5SP515-201ENST00000364570 118 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RNU1-64P-201ENST00000365443 163 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-444P-201ENST00000383988 108 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC097374.1-203ENST00000400783 485 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC245054.1-201ENST00000420944 258 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 SDCBPP2-201ENST00000424643 885 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 COX6B1P7-201ENST00000430845 235 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 HSFY6P-201ENST00000445573 403 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 HMGN3P1-201ENST00000453847 193 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RPL7P22-201ENST00000466005 733 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AP000926.1-201ENST00000479573 241 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 RPS3AP14-201ENST00000483907 780 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 HMGB1P33-201ENST00000563485 527 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AL354984.3-201ENST00000604803 325 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC009994.1-201ENST00000606889 253 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC008536.2-201ENST00000607284 349 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC004825.2-201ENST00000616634 455 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC009033.1-201ENST00000624279 431 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 AC099654.10-201ENST00000640395 161 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 CASC19-280ENST00000642102 1351 ntBASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTDP1Q9Y5B0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTDP1Q9Y5B0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms