Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RNU6-196P-201ENST00000384315 107 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RNU6-1207P-201ENST00000384343 107 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 SNORA48.7-201ENST00000391302 135 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AL356057.3-201ENST00000402607 340 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AL591848.1-201ENST00000413092 322 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AL358176.2-201ENST00000425769 204 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RPS3AP52-201ENST00000435639 297 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RPS26P56-201ENST00000444468 240 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RPL23AP24-201ENST00000458203 385 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RPS4XP10-201ENST00000465034 731 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RN7SL558P-201ENST00000497468 299 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AL163153.1-201ENST00000554223 283 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RPL21P12-201ENST00000559810 515 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 SNORA74C-1-201ENST00000580726 201 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 MIR3138-201ENST00000585238 82 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 CYP2C61P-201ENST00000604072 290 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 APOOP1-201ENST00000604695 592 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AC015908.5-201ENST00000623289 343 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 XPOTP1-201ENST00000443317 2398 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AC066616.2-201ENST00000559334 1481 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 Y_RNA.197-201ENST00000364004 102 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU4-66P-201ENST00000365199 138 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU6-38P-201ENST00000384085 107 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU6-1013P-201ENST00000384180 107 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 MIR454-201ENST00000390180 115 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 GSTM3P2-201ENST00000412746 530 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RPL31P45-201ENST00000419532 356 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AP000936.3-201ENST00000438127 255 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 NANOGP10-201ENST00000453325 895 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 CYCSP34-201ENST00000458172 304 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU6-333P-201ENST00000459117 107 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AC015795.1-201ENST00000513669 327 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 SETP2-201ENST00000553886 926 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 VN1R85P-201ENST00000601587 426 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AL122125.1-201ENST00000616999 600 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 AP005019.3-201ENST00000620418 560 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 SMG1P7-201ENST00000565246 2704 ntBASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.05□□□□□ -1.44
RTCBQ9Y3I0 MTCO1P7-201ENST00000419523 1542 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AL450345.1-202ENST00000605741 3881 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC011155.1-201ENST00000316512 456 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 RNU6-574P-201ENST00000384265 107 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 SNORA37-201ENST00000384504 129 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AL590233.1-201ENST00000430017 456 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC108734.1-201ENST00000439549 399 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 RN7SKP219-201ENST00000516825 296 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 Y_RNA.719-201ENST00000517156 106 ntBASIC6.04□□□□□ -1.44
RTCBQ9Y3I0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms