Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC092490.3-201ENST00000545370 572 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 MIR7853-201ENST00000584820 132 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC011921.3-201ENST00000605540 361 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AL391813.2-201ENST00000609113 322 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AL355365.1-201ENST00000616480 294 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 AC009237.17-201ENST00000618111 748 ntBASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
PDZRN3Q9UPQ7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.19-201ENST00000362462 99 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.65-201ENST00000362846 100 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RNU1-149P-201ENST00000390870 161 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 UBE2V1P2-201ENST00000397758 440 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-1050P-201ENST00000410388 107 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AL136133.1-201ENST00000413694 376 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 SRSF1P1-201ENST00000424058 520 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RNU7-180P-201ENST00000459240 63 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RNU6-941P-201ENST00000516346 108 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 SETP2-201ENST00000553886 926 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC006600.1-201ENST00000572529 153 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AP005403.1-201ENST00000579720 229 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 MIR3934-201ENST00000579806 107 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC121334.2-201ENST00000605387 271 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AL353662.3-201ENST00000625131 237 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 AC073869.8-201ENST00000641806 335 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 PABPC1P7-201ENST00000413177 1513 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 PANDAR-201ENST00000629595 1506 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 ZNF285B-201ENST00000561698 1767 ntBASIC6.85□□□□□ -1.31
PDZRN3Q9UPQ7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 OR55B1P-203ENST00000641518 2602 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AC005183.1-201ENST00000603687 1979 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 Z95327.2-201ENST00000414579 1873 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.367-201ENST00000365544 101 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 SNORD56.6-201ENST00000384569 71 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AL591848.1-201ENST00000413092 322 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 MRPS21P2-201ENST00000424704 264 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 C4BPAP2-201ENST00000428434 478 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AL049745.1-201ENST00000433953 286 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 RPS3AP54-201ENST00000435535 734 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AL031659.1-201ENST00000447075 539 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 NF1P3-201ENST00000457709 450 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 Y_RNA.654-201ENST00000497848 106 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 HIGD1AP13-201ENST00000509878 289 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 RAC1P9-201ENST00000604990 392 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 FAM25E-202ENST00000608562 189 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AP004247.3-201ENST00000608682 624 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AC093671.1-201ENST00000624981 2929 ntBASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.84□□□□□ -1.31
PDZRN3Q9UPQ7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
PDZRN3Q9UPQ7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
PDZRN3Q9UPQ7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PDZRN3Q9UPQ7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.83□□□□□ -1.32
PDZRN3Q9UPQ7 AL139276.1-201ENST00000311910 1001 ntBASIC6.83□□□□□ -1.32
PDZRN3Q9UPQ7 RNU4-31P-201ENST00000384211 141 ntBASIC6.83□□□□□ -1.32
PDZRN3Q9UPQ7 Y_RNA.594-201ENST00000410373 140 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms