Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC011712.1-201ENST00000588959 234 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC078795.3-201ENST00000602913 472 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AL355472.4-201ENST00000610233 626 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC135507.2-201ENST00000612443 309 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 AC079597.1-201ENST00000624306 508 ntBASIC4.46□□□□□ -1.7
NDC1Q9BTX1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NDC1Q9BTX1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RPL32P3-201ENST00000359025 275 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RNU6-845P-201ENST00000362578 103 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SNORD113.2-201ENST00000364166 89 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RNU6-359P-201ENST00000365466 108 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RNU6-767P-201ENST00000384132 107 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SNORA70F-201ENST00000384142 135 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 U3.20-201ENST00000390909 217 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RNA5SP397-201ENST00000391323 118 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AL356057.2-201ENST00000403318 432 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC007283.2-201ENST00000424739 197 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RPS20P1-201ENST00000434853 354 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 BX276092.4-201ENST00000452056 248 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RPS4XP10-201ENST00000465034 731 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC087385.1-201ENST00000475062 312 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 HMGB1P21-201ENST00000502313 581 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AK3P4-201ENST00000504283 583 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RN7SKP277-201ENST00000516895 283 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC087477.6-201ENST00000559595 843 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 MIR4284-201ENST00000578924 81 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 MIR4795-201ENST00000584182 89 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC068790.3-201ENST00000602988 553 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 YWHAQP7-201ENST00000603536 658 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC126177.8-201ENST00000618339 1015 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 MIR6758-201ENST00000620653 63 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 AC024940.5-201ENST00000622889 474 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
NDC1Q9BTX1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NDC1Q9BTX1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RNU6-1120P-201ENST00000362988 108 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RNU6-169P-201ENST00000365336 107 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 SNORA69-201ENST00000383895 132 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RNU6-1158P-201ENST00000391167 107 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 ARL4AP5-201ENST00000404372 599 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 U3.35-201ENST00000408405 208 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 EIF4HP2-201ENST00000424380 563 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC008065.1-201ENST00000428525 348 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RPS15AP9-201ENST00000439856 381 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC108751.2-201ENST00000469993 231 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 Y_RNA.701-201ENST00000516812 110 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 RNU6-1220P-201ENST00000517126 108 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.44□□□□□ -1.7
NDC1Q9BTX1 AC022616.3-201ENST00000523940 148 ntBASIC4.44□□□□□ -1.7
NDC1Q9BTX1 PHBP17-201ENST00000528576 541 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms