Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC138969.1-213ENST00000331436 462 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 Y_RNA.48-201ENST00000362710 103 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 Y_RNA.398-201ENST00000383952 99 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RNU6-1226P-201ENST00000384317 107 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 MIR23B-201ENST00000384832 97 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 SNORA48.7-201ENST00000391302 135 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 U3.39-201ENST00000408569 239 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RNU4-78P-201ENST00000410940 126 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 EIF4EP2-201ENST00000422816 654 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC087650.1-201ENST00000431445 468 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AL353597.2-202ENST00000434901 373 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 CEACAMP6-201ENST00000452007 574 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RPS23P6-201ENST00000466136 431 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RN7SL269P-201ENST00000467795 305 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC087385.1-201ENST00000475062 312 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RN7SL583P-201ENST00000475692 287 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RPS24P16-201ENST00000497294 392 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AF186190.1-201ENST00000517470 480 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC109446.1-201ENST00000566172 220 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC106785.4-201ENST00000569492 412 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC005341.1-201ENST00000571086 708 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 MIR3934-201ENST00000579806 107 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 COX6CP3-201ENST00000580869 223 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 RPS29P30-201ENST00000600975 111 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 U2.17-201ENST00000611454 95 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 MIR4679-1-201ENST00000637619 75 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 PROS2P-201ENST00000474651 1951 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC009120.2-204ENST00000621548 2032 ntBASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP3BQ96NU0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3BQ96NU0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3BQ96NU0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP3BQ96NU0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC005224.3-201ENST00000584683 2140 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC011504.1-201ENST00000623331 4103 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AL121839.2-201ENST00000565058 6943 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNA5SP65-201ENST00000363166 119 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-47P-201ENST00000383866 107 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 MIR19A-201ENST00000384878 82 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 MIR192-201ENST00000384915 110 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-278P-201ENST00000390945 109 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 SNORA53-201ENST00000391141 249 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 HMGN1P24-201ENST00000412282 298 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 BX276092.3-201ENST00000424182 230 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 FHP1-201ENST00000442741 703 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 BTF3P6-201ENST00000448054 499 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RPL23AP31-201ENST00000456160 467 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RPL21P8-201ENST00000465083 535 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC068305.1-201ENST00000497406 726 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-615P-201ENST00000516065 106 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-347P-201ENST00000516658 105 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 RNU6-323P-201ENST00000521915 107 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AC012339.2-201ENST00000523996 453 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AL078605.1-201ENST00000603529 500 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AL451044.1-201ENST00000604867 238 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 AL353662.3-201ENST00000625131 237 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 NXPH1-205ENST00000602349 1953 ntBASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP3BQ96NU0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP3BQ96NU0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms