Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC091862.1-201ENST00000438016 1100 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RPL22P17-201ENST00000438729 315 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC244505.5-201ENST00000443639 207 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 NUTF2P3-201ENST00000448540 384 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 snoU13.8-201ENST00000458890 104 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 KLF3P2-201ENST00000465138 268 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC078817.1-201ENST00000492623 435 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TOMM20P2-201ENST00000540082 421 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RPL23AP87-202ENST00000573039 466 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC137800.2-201ENST00000574375 120 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC090616.5-202ENST00000582111 297 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 IGHV3-29-201ENST00000604817 344 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC087241.4-201ENST00000612441 480 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 MLECP1-201ENST00000615893 709 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC006338.2-201ENST00000616864 791 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL139089.1-201ENST00000620372 975 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 MIR8059-201ENST00000620427 81 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RNY4P24-201ENST00000362735 96 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 SNORD35B-201ENST00000363660 87 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 Y_RNA.234-201ENST00000364409 97 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-1215P-201ENST00000384441 102 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 Y_RNA.608-201ENST00000410647 95 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RPS3AP44-201ENST00000425466 790 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC006011.1-201ENST00000442758 349 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RN7SL604P-201ENST00000492589 296 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC146944.2-203ENST00000502493 354 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC096751.1-202ENST00000502691 1067 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC093824.1-201ENST00000508796 343 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 NDUFB4P2-201ENST00000509515 391 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC139495.1-202ENST00000513164 354 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-27P-201ENST00000516146 107 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 SNORA31.9-201ENST00000516429 84 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-714P-201ENST00000516963 103 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 MIR3939-201ENST00000582614 106 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC009977.1-201ENST00000586015 570 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AL021997.1-201ENST00000605757 193 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC098614.4-201ENST00000607601 462 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC006329.2-201ENST00000611491 394 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AL596245.1-201ENST00000618994 362 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC040168.1-201ENST00000623594 991 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AC090337.1-201ENST00000579651 2074 ntBASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP3Q96JB5 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-761P-201ENST00000384148 107 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-1207P-201ENST00000384343 107 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 RPS20P2-201ENST00000402520 389 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 HMGB3P23-201ENST00000414981 585 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC104651.1-201ENST00000427559 735 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC010975.2-201ENST00000427781 588 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AC099563.1-201ENST00000456086 418 ntBASIC4.62□□□□□ -1.67
CDK5RAP3Q96JB5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms