Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTP4Q96DX8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RTP4Q96DX8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 ASNSP1-201ENST00000518311 1939 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU5F-7P-201ENST00000363696 115 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU6-777P-201ENST00000364265 104 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU6-283P-201ENST00000364788 107 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU6-1283P-201ENST00000365314 105 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU6-297P-201ENST00000384636 107 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNA5SP424-201ENST00000390988 115 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 SOD2P1-201ENST00000396543 562 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 SNRPEP2-201ENST00000397592 279 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 PRRC2CP1-201ENST00000404428 159 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC233981.1-201ENST00000423224 461 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC006946.1-201ENST00000429106 328 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 ZYG11AP1-201ENST00000430329 837 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 OR2B8P-201ENST00000432841 938 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 GOT2P5-201ENST00000433995 546 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 MTND6P18-201ENST00000439477 513 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 HMGB3P9-201ENST00000441799 583 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 MTND4P18-201ENST00000447010 465 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 RNU6-352P-201ENST00000516908 107 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC025881.1-201ENST00000518851 512 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 CCNG2P1-201ENST00000549521 1000 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AL389895.1-201ENST00000554127 252 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC091489.2-201ENST00000566263 604 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 MIR4512-201ENST00000583257 77 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC017100.2-201ENST00000584628 355 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AL355073.2-201ENST00000612106 557 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC026368.1-201ENST00000614934 690 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC231657.1-201ENST00000624313 397 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 AC012442.3-202ENST00000636742 206 ntBASIC3.84□□□□□ -1.79
RTP4Q96DX8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RTP4Q96DX8 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.84□□□□□ -1.8
RTP4Q96DX8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.8
RTP4Q96DX8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
RTP4Q96DX8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
RTP4Q96DX8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTP4Q96DX8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTP4Q96DX8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTP4Q96DX8 RNA5SP391-201ENST00000363456 119 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTP4Q96DX8 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 RNU2-28P-201ENST00000410457 189 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 Y_RNA.604-201ENST00000410574 102 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 AC109780.2-201ENST00000413467 845 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 RAC1P3-201ENST00000416129 580 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 IPMKP1-201ENST00000425988 855 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 NDUFB1P1-201ENST00000435191 180 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.83□□□□□ -1.8
RTP4Q96DX8 AP000797.1-201ENST00000478870 387 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 AC006499.2-201ENST00000513470 337 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 RNU6-150P-201ENST00000516237 95 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 RN7SKP96-201ENST00000516948 297 ntBASIC3.83□□□□□ -1.8
RTP4Q96DX8 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms