Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-CQ95604 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-CQ95604 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-CQ95604 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-CQ95604 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-CQ95604 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 AL355834.1-201ENST00000556602 3965 ntBASIC6.17□□□□□ -1.42
HLA-CQ95604 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HLA-CQ95604 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HLA-CQ95604 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HLA-CQ95604 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-CQ95604 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-CQ95604 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-CQ95604 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-CQ95604 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 RNA5SP183-201ENST00000362452 119 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 Y_RNA.83-201ENST00000363005 113 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 U8.8-201ENST00000365399 135 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AC013442.1-201ENST00000397347 228 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AL513475.1-201ENST00000406602 315 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 RNU2-33P-201ENST00000410344 192 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 RPL21P90-201ENST00000415692 466 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-CQ95604 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-CQ95604 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-CQ95604 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-CQ95604 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 AC008958.1-201ENST00000511047 682 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AC113155.1-201ENST00000511141 769 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-CQ95604 CBX3P4-201ENST00000538909 354 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 MIR4697-201ENST00000582977 78 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-CQ95604 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 AC138907.8-201ENST00000623981 2256 ntBASIC6.16□□□□□ -1.42
HLA-CQ95604 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
HLA-CQ95604 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HLA-CQ95604 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-CQ95604 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-CQ95604 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-CQ95604 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-CQ95604 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 AL359195.2-201ENST00000623657 4412 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 RNA5SP234-201ENST00000363916 119 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 Y_RNA.506-201ENST00000384494 102 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 SNORD73A-201ENST00000386062 65 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 SNORD115-46-201ENST00000390982 71 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 AC092423.1-201ENST00000430165 186 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 PSMD10P3-201ENST00000437000 448 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-CQ95604 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-CQ95604 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-CQ95604 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-CQ95604 NDUFB4P10-201ENST00000452541 359 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 AC009120.1-201ENST00000493458 473 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HLA-CQ95604 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.15□□□□□ -1.42
HLA-CQ95604 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-CQ95604 AC074050.1-201ENST00000563247 211 ntBASIC6.15□□□□□ -1.42
HLA-CQ95604 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.15□□□□□ -1.42
HLA-CQ95604 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.15□□□□□ -1.42
HLA-CQ95604 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.15□□□□□ -1.42
HLA-CQ95604 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.15□□□□□ -1.43
HLA-CQ95604 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.15□□□□□ -1.43
HLA-CQ95604 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HLA-CQ95604 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.15□□□□□ -1.43
HLA-CQ95604 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms