Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC020923.1-201ENST00000624021 917 ntBASIC2.52□□□□□ -2.01
LMX1AQ8TE12 U6.107-201ENST00000637108 79 ntBASIC2.52□□□□□ -2.01
LMX1AQ8TE12 AC117529.2-201ENST00000512159 2068 ntBASIC2.52□□□□□ -2.01
LMX1AQ8TE12 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LMX1AQ8TE12 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
LMX1AQ8TE12 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
LMX1AQ8TE12 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AL512646.1-201ENST00000269395 1077 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 SAR1AP2-201ENST00000392696 594 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 RNU2-17P-201ENST00000410290 190 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 VTA1P1-201ENST00000414044 866 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC009963.1-201ENST00000417265 157 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 MORF4L1P7-201ENST00000426038 703 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 YWHAZP7-201ENST00000436906 631 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC011816.1-201ENST00000441346 546 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 GAPDHP27-201ENST00000447427 1020 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC008481.1-201ENST00000463278 396 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC128713.1-201ENST00000471495 306 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 HMGB1P22-201ENST00000505315 124 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 CIR1P1-201ENST00000524055 1133 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC243972.3-201ENST00000539655 198 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AC012182.1-201ENST00000570133 895 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 SNORD53-201ENST00000579969 78 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AL109653.1-201ENST00000603091 248 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 KATNBL1P1-201ENST00000605192 748 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 AL390240.1-201ENST00000612950 384 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 MIR6715A-201ENST00000615929 79 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 U4.3-201ENST00000621047 82 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 MTND5P28-201ENST00000438005 1594 ntBASIC2.51□□□□□ -2.01
LMX1AQ8TE12 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LMX1AQ8TE12 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 FAM35CP-201ENST00000554755 2470 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 RNU6-543P-201ENST00000362576 108 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AL354719.1-201ENST00000406535 843 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 ARL2BPP3-201ENST00000421226 480 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 COX6CP2-201ENST00000444980 225 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC092685.1-201ENST00000447960 1243 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 MTND2P3-201ENST00000452458 470 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 RPL21P18-201ENST00000469899 480 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 RNU1-61P-201ENST00000516107 151 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC103833.1-201ENST00000517442 172 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AL133393.1-201ENST00000603277 287 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC135178.6-201ENST00000605314 398 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 CTSLP2-204ENST00000629029 392 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC083865.1-201ENST00000636634 831 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LMX1AQ8TE12 AC073055.1-201ENST00000456901 1621 ntBASIC2.5□□□□□ -2.01
LMX1AQ8TE12 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 OR5T3-201ENST00000303059 1023 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 RNU6-1181P-201ENST00000384191 106 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SNORA36C-201ENST00000384289 132 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SNORA67.4-201ENST00000384688 142 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 MIR142-201ENST00000384835 87 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SFR1P1-201ENST00000403720 688 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 TOMM22P1-201ENST00000418578 312 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.49□□□□□ -2.01
LMX1AQ8TE12 AL034418.1-201ENST00000448675 860 ntBASIC2.49□□□□□ -2.01
LMX1AQ8TE12 RPS24P6-201ENST00000452670 400 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms