Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RNA5SP217-201ENST00000515959 91 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 RN7SKP60-201ENST00000516985 239 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 SCARNA20.6-201ENST00000517251 106 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 MTCO3P15-201ENST00000526563 574 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AC093519.1-201ENST00000566109 298 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 MIR3186-201ENST00000577404 85 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AC006116.7-201ENST00000590141 756 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AL669831.4-202ENST00000590817 238 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 DNAJC19P3-201ENST00000594491 331 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 NRBF2P5-201ENST00000603087 788 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 AP003973.1-201ENST00000604639 691 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 ATP1B3P1-201ENST00000605365 821 ntBASIC2.55□□□□□ -2
LINC01560Q8TB33 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
LINC01560Q8TB33 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.55□□□□□ -2
LINC01560Q8TB33 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC01560Q8TB33 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
LINC01560Q8TB33 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 RNU6-335P-201ENST00000364563 113 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 RNU6-1176P-201ENST00000390955 107 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 EI24P2-201ENST00000397776 1076 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AL583834.1-201ENST00000406943 343 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 RNA5SP184-201ENST00000411071 108 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 AL139281.1-201ENST00000422120 335 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.54□□□□□ -2
LINC01560Q8TB33 PTP4A1P7-201ENST00000423476 514 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 RAC1P8-201ENST00000427086 527 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.54□□□□□ -2
LINC01560Q8TB33 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.54□□□□□ -2
LINC01560Q8TB33 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 RPS12P18-201ENST00000442381 270 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 MTCO3P2-201ENST00000457365 171 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC010401.1-201ENST00000463867 348 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 RPL9P32-201ENST00000464118 620 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 RPL31P50-201ENST00000471002 296 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 ST13P14-201ENST00000474095 734 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC092451.1-201ENST00000480211 153 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.54□□□□□ -2
LINC01560Q8TB33 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 MTCYBP41-201ENST00000528913 1123 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 NDUFS5P6-201ENST00000529136 295 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AP001317.1-201ENST00000531194 960 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 OR5D17P-201ENST00000531492 978 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 LSM6P2-201ENST00000552208 177 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AL389895.1-201ENST00000554127 252 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.54□□□□□ -2
LINC01560Q8TB33 AC103881.1-201ENST00000603476 538 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC018754.1-201ENST00000607486 925 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC107294.1-201ENST00000609524 467 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 AL138960.2-201ENST00000625145 535 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 AC073476.4-201ENST00000628409 72 ntBASIC2.54□□□□□ -2
LINC01560Q8TB33 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.54□□□□□ -2
LINC01560Q8TB33 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01560Q8TB33 USP8P1-201ENST00000494673 3183 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 GABPAP-201ENST00000419271 1356 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.53□□□□□ -2
LINC01560Q8TB33 SNORA31-201ENST00000362607 130 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU6-707P-201ENST00000364647 95 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU6-730P-201ENST00000383954 104 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 MIR184-201ENST00000384962 84 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU6-298P-201ENST00000390888 96 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL023807.1-201ENST00000407932 359 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AC092634.6-201ENST00000418558 192 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL049610.1-201ENST00000423374 372 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.53□□□□□ -2
LINC01560Q8TB33 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.53□□□□□ -2
LINC01560Q8TB33 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.53□□□□□ -2
LINC01560Q8TB33 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01560Q8TB33 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LINC01560Q8TB33 RPL23AP55-201ENST00000498163 452 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.53□□□□□ -2
LINC01560Q8TB33 ARL2BPP6-201ENST00000512757 439 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU1-143P-201ENST00000516296 146 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU2-58P-201ENST00000516403 183 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 SNORA48.10-201ENST00000516965 160 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.53□□□□□ -2
LINC01560Q8TB33 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms