Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 COX6CP2-201ENST00000444980 225 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC078857.1-201ENST00000469870 667 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC027338.1-201ENST00000514840 825 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC104057.1-201ENST00000515547 497 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 VN1R88P-201ENST00000596787 292 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC091057.2-201ENST00000602594 792 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 BNIP3P19-201ENST00000605397 577 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 AC018755.4-201ENST00000619715 454 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 MIR3651-201ENST00000630427 90 ntBASIC2.94□□□□□ -1.94
CDKL3Q8IVW4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 RNU6-481P-201ENST00000384194 107 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 MIR181B1-201ENST00000385240 110 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 MT-TC-201ENST00000387405 66 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 SSXP9-201ENST00000417503 292 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 NIPA2P5-201ENST00000452282 464 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 ERHP1-201ENST00000523006 310 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 HPRT1P3-201ENST00000539521 576 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AC092470.1-201ENST00000546187 132 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AADACP1-206ENST00000561502 1193 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 COX6CP3-201ENST00000580869 223 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AL669831.4-202ENST00000590817 238 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AL512506.1-201ENST00000613918 449 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 MIR8084-201ENST00000614105 89 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 VN1R9P-201ENST00000614184 867 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AP001002.2-201ENST00000625137 386 ntBASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CDKL3Q8IVW4 AL512283.1-201ENST00000606756 1384 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RNU6-799P-201ENST00000363567 107 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RNU6-1226P-201ENST00000384317 107 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RNA5SP56-201ENST00000410277 118 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RAD23BP2-201ENST00000416003 1207 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC010881.1-201ENST00000433830 235 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC092170.1-201ENST00000440211 356 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 OR6K1P-201ENST00000456766 971 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RPS29P12-201ENST00000460178 152 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RPL21P18-201ENST00000469899 480 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RPL23AP11-201ENST00000475260 469 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 RPS27P23-201ENST00000487608 251 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 SNORA9.3-201ENST00000516383 129 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC104986.1-201ENST00000517978 436 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 IGKV2D-36-201ENST00000518643 226 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC095057.3-201ENST00000567102 1157 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC022069.1-201ENST00000582910 658 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AL355493.4-201ENST00000618530 292 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AC097372.4-201ENST00000625025 466 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
CDKL3Q8IVW4 MTCO1P6-201ENST00000481192 1384 ntBASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 AP003122.5-201ENST00000527668 3766 ntBASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 RNU6-609P-201ENST00000365459 107 ntBASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CDKL3Q8IVW4 Y_RNA.493-201ENST00000384422 102 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms