Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 AC011933.2-201ENST00000578539 2790 ntBASIC5.78□□□□□ -1.48
LYSMD3Q7Z3D4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
LYSMD3Q7Z3D4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AP005435.3-201ENST00000531260 3198 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 Y_RNA.65-201ENST00000362846 100 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SKP186-201ENST00000365371 303 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-946P-201ENST00000383878 107 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-48P-201ENST00000384161 107 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 HMGB3P7-201ENST00000400214 611 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RNU2-33P-201ENST00000410344 192 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RNU2-25P-201ENST00000411041 191 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 UBE2FP1-201ENST00000416536 447 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 CRIP1P1-201ENST00000427567 185 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 NOP56P2-201ENST00000447491 769 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC007967.1-201ENST00000455422 1159 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RPL12P39-201ENST00000455456 496 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RPL23AP31-201ENST00000456160 467 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RPS17P15-201ENST00000475609 349 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC009120.1-201ENST00000493458 473 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 HMGN1P28-201ENST00000521340 364 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC096996.1-201ENST00000563813 325 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC007448.1-201ENST00000582714 234 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AL133481.2-203ENST00000607558 139 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 AL731566.2-201ENST00000618971 317 ntBASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.77□□□□□ -1.49
LYSMD3Q7Z3D4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RBPJP2-201ENST00000618187 1444 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AL159987.1-201ENST00000347911 293 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 MIR375-201ENST00000362103 64 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-1078P-201ENST00000364522 103 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-378P-201ENST00000384324 107 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNA5SP91-201ENST00000390902 119 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 SNORD58.1-201ENST00000391313 66 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 HMGB1P20-201ENST00000402555 677 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RPS4XP7-201ENST00000406274 780 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SKP229-201ENST00000410465 302 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-121P-201ENST00000410525 99 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU2-15P-201ENST00000410692 191 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNA5SP111-201ENST00000411386 101 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 SYF2P2-201ENST00000417620 583 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 EZH2P1-201ENST00000431167 291 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 HMGB3P24-201ENST00000433260 622 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU7-169P-201ENST00000459456 61 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RPS23P6-201ENST00000466136 431 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SL273P-201ENST00000481561 299 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AC135721.1-201ENST00000497954 479 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 SNORA70.11-201ENST00000515987 138 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 SNORA70.13-201ENST00000516116 138 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNU4-71P-201ENST00000516258 113 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AC126615.2-201ENST00000553003 515 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 RNF138P2-201ENST00000603490 592 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 MIR6886-201ENST00000619864 61 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 AC239868.2-201ENST00000564237 4527 ntBASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LYSMD3Q7Z3D4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms