Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR6830-201ENST00000636015 70 ntBASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ZNF549Q6P9A3 AC009951.1-201ENST00000623674 2614 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MTND4P29-201ENST00000503122 1372 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RNY4P14-201ENST00000363656 96 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 Y_RNA.813-201ENST00000364639 102 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RNU4-6P-201ENST00000410804 122 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC073264.1-201ENST00000411508 416 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC069157.1-201ENST00000421749 137 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC233728.2-201ENST00000425348 757 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 NPM1P34-201ENST00000428821 893 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 TPT1P14-201ENST00000448018 505 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RPS17P13-201ENST00000448974 407 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 snoU109.1-201ENST00000459339 135 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RPL7P19-201ENST00000469948 618 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 KLRA1P-201ENST00000503499 986 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 ARL4AP2-201ENST00000507378 601 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC093809.1-201ENST00000509155 340 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC108064.1-201ENST00000513791 460 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RN7SKP122-201ENST00000515923 296 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 SNORA18.6-201ENST00000516792 115 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 SNORA20.3-201ENST00000516880 132 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC087369.1-201ENST00000520775 996 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC104383.1-201ENST00000530297 370 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AP004247.1-201ENST00000531556 1289 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC091516.1-201ENST00000549191 703 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC090502.2-201ENST00000549267 280 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MIR544B-201ENST00000582372 78 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MIR4307-201ENST00000582802 84 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 C8orf59P2-201ENST00000603441 271 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 PRELID3BP8-201ENST00000604148 295 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC091167.4-201ENST00000605079 184 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC097468.3-201ENST00000607956 456 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL592295.2-201ENST00000612578 206 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC012150.2-201ENST00000621300 544 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AL359880.1-201ENST00000621879 266 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC006378.2-201ENST00000623178 2476 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AP003400.5-201ENST00000624827 617 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 IPO8P1-201ENST00000455509 3109 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AP002001.2-201ENST00000529025 1469 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 AC018529.3-201ENST00000624212 2254 ntBASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.91□□□□□ -1.78
ZNF549Q6P9A3 RLIMP1-201ENST00000339626 1680 ntBASIC3.9□□□□□ -1.78
ZNF549Q6P9A3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ZNF549Q6P9A3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 MTCO3P40-201ENST00000392516 676 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 RNU2-65P-201ENST00000410162 185 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 RPL7AP73-201ENST00000413490 353 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC016831.2-201ENST00000417179 352 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 RPL7P30-201ENST00000420888 709 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL513174.1-201ENST00000423182 629 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC233981.1-201ENST00000423224 461 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL445669.1-201ENST00000426743 755 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 MTND4LP10-201ENST00000435146 291 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC009961.2-201ENST00000435771 251 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL356535.1-201ENST00000440335 398 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 MTND6P13-201ENST00000443510 523 ntBASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.9□□□□□ -1.79
ZNF549Q6P9A3 GAPDHP17-201ENST00000449858 1001 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms