Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 RPL23AP89-201ENST00000439324 255 ntBASIC3.8□□□□□ -1.8
LTBQ06643 PGBD4P3-201ENST00000440731 581 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.8□□□□□ -1.8
LTBQ06643 RPL7P36-201ENST00000444633 681 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 RPL39P6-201ENST00000448289 150 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AL590365.1-201ENST00000450788 243 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.8□□□□□ -1.8
LTBQ06643 AC013267.1-201ENST00000458227 267 ntBASIC3.8□□□□□ -1.8
LTBQ06643 SNORA59A-201ENST00000459326 152 ntBASIC3.8□□□□□ -1.8
LTBQ06643 snoU109.1-201ENST00000459339 135 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC092757.1-201ENST00000467293 467 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC010683.1-201ENST00000473673 378 ntBASIC3.8□□□□□ -1.8
LTBQ06643 FCF1P3-201ENST00000496394 590 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC074344.1-201ENST00000512823 224 ntBASIC3.8□□□□□ -1.8
LTBQ06643 SNORA18.6-201ENST00000516792 115 ntBASIC3.8□□□□□ -1.8
LTBQ06643 MTND4LP18-201ENST00000526864 291 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 AC022878.1-201ENST00000530684 149 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC118273.2-201ENST00000532092 465 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 PDCD5P1-201ENST00000543528 309 ntBASIC3.8□□□□□ -1.8
LTBQ06643 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.8□□□□□ -1.8
LTBQ06643 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.8□□□□□ -1.8
LTBQ06643 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.8□□□□□ -1.8
LTBQ06643 MIR544B-201ENST00000582372 78 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.8□□□□□ -1.8
LTBQ06643 AC009977.1-201ENST00000586015 570 ntBASIC3.8□□□□□ -1.8
LTBQ06643 VN1R79P-201ENST00000593540 513 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC112187.2-201ENST00000604345 283 ntBASIC3.8□□□□□ -1.8
LTBQ06643 AC112191.3-201ENST00000604371 277 ntBASIC3.8□□□□□ -1.8
LTBQ06643 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 AC022140.2-201ENST00000623500 188 ntBASIC3.8□□□□□ -1.8
LTBQ06643 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.8□□□□□ -1.8
LTBQ06643 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LTBQ06643 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.8□□□□□ -1.8
LTBQ06643 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.8□□□□□ -1.8
LTBQ06643 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 AC073544.1-201ENST00000600110 1595 ntBASIC3.8□□□□□ -1.8
LTBQ06643 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LTBQ06643 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LTBQ06643 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 Y_RNA.372-201ENST00000365599 102 ntBASIC3.79□□□□□ -1.8
LTBQ06643 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
LTBQ06643 RNU6-533P-201ENST00000384144 107 ntBASIC3.79□□□□□ -1.8
LTBQ06643 SNORA9-201ENST00000384215 133 ntBASIC3.79□□□□□ -1.8
LTBQ06643 RNU6-809P-201ENST00000384461 107 ntBASIC3.79□□□□□ -1.8
LTBQ06643 RPS3AP36-201ENST00000398190 775 ntBASIC3.79□□□□□ -1.8
LTBQ06643 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.79□□□□□ -1.8
LTBQ06643 RN7SKP177-201ENST00000410567 355 ntBASIC3.79□□□□□ -1.8
LTBQ06643 JKAMPP1-201ENST00000413804 919 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.79□□□□□ -1.8
LTBQ06643 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 AL109913.1-201ENST00000421173 514 ntBASIC3.79□□□□□ -1.8
LTBQ06643 SDCBPP2-201ENST00000424643 885 ntBASIC3.79□□□□□ -1.8
LTBQ06643 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LTBQ06643 NPM1P34-201ENST00000428821 893 ntBASIC3.79□□□□□ -1.8
LTBQ06643 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 NFU1P2-201ENST00000448700 469 ntBASIC3.79□□□□□ -1.8
LTBQ06643 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 BTF3P5-201ENST00000457252 467 ntBASIC3.79□□□□□ -1.8
LTBQ06643 RN7SL585P-201ENST00000470538 280 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC006511.1-201ENST00000470614 315 ntBASIC3.79□□□□□ -1.8
LTBQ06643 RPL23AP2-201ENST00000471227 466 ntBASIC3.79□□□□□ -1.8
LTBQ06643 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC041039.1-201ENST00000485656 536 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 RPL35P6-201ENST00000490024 372 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LTBQ06643 AC093809.1-201ENST00000509155 340 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC026412.2-201ENST00000512270 1075 ntBASIC3.79□□□□□ -1.8
LTBQ06643 NPM1P41-201ENST00000512920 831 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 ARL2BPP5-201ENST00000523141 481 ntBASIC3.79□□□□□ -1.8
LTBQ06643 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.79□□□□□ -1.8
LTBQ06643 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.79□□□□□ -1.8
LTBQ06643 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.79□□□□□ -1.8
LTBQ06643 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.79□□□□□ -1.8
LTBQ06643 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms