| APLP2 | Q06481 | SNORD116-15-201 | ENST00000384445 | 92 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SNORD116-20-201 | ENST00000384529 | 92 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SNORD116-19-201 | ENST00000384729 | 92 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MIR649-201 | ENST00000384843 | 97 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SYCE3-202 | ENST00000406915 | 448 nt | APPRIS P1 TSL 2 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNA5SP107-201 | ENST00000411358 | 122 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | DPPA2P3-201 | ENST00000411853 | 655 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC007349.1-201 | ENST00000419326 | 587 nt | TSL 4 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | TMEM167AP1-201 | ENST00000423409 | 219 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC009478.1-201 | ENST00000429816 | 562 nt | TSL 3 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RN7SL352P-201 | ENST00000466002 | 277 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ABCA17P-206 | ENST00000512848 | 467 nt | TSL 2 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNA5SP340-201 | ENST00000517132 | 107 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MDM2-232 | ENST00000544561 | 213 nt | TSL 5 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SLC7A7-210 | ENST00000554517 | 1158 nt | TSL 5 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | EGLN3-AS1-201 | ENST00000555922 | 308 nt | TSL 3 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | CLMN-206 | ENST00000556441 | 452 nt | TSL 5 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL353796.1-201 | ENST00000561542 | 3241 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL160281.1-201 | ENST00000605307 | 311 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MIR1910-201 | ENST00000636955 | 80 nt | BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | CNTN1-204 | ENST00000547849 | 3125 nt | TSL 1 (best) BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MUC7-202 | ENST00000413702 | 2540 nt | APPRIS P2 TSL 4 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINC01504-201 | ENST00000436054 | 2078 nt | TSL 2 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | NBEA-207 | ENST00000537702 | 4089 nt | TSL 2 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ALG2-202 | ENST00000319033 | 1627 nt | TSL 1 (best) BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC092378.1-202 | ENST00000500117 | 2296 nt | TSL 2 BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ZNF479-201 | ENST00000319636 | 1811 nt | APPRIS P1 TSL 1 (best) BASIC | 9.52 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | FLJ12825-201 | ENST00000515617 | 3942 nt | TSL 2 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | FAT4-202 | ENST00000394329 | 16123 nt | APPRIS P1 TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | C12orf4-209 | ENST00000545746 | 2168 nt | APPRIS P1 TSL 1 (best) BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | NBPF26-202 | ENST00000611287 | 2701 nt | TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ELOVL5-203 | ENST00000370918 | 3081 nt | TSL 2 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC007785.2-201 | ENST00000598627 | 1916 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LCN1P2-201 | ENST00000372030 | 223 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MS4A4E-201 | ENST00000398984 | 479 nt | TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | GLULP6-201 | ENST00000399502 | 913 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL357075.1-201 | ENST00000404107 | 726 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC116036.1-201 | ENST00000412199 | 367 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL355989.1-202 | ENST00000419406 | 408 nt | TSL 3 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | C6orf52-203 | ENST00000426700 | 493 nt | APPRIS P2 TSL 2 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RPS10P18-201 | ENST00000442662 | 495 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | HSPE1P25-201 | ENST00000455484 | 251 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNU7-138P-201 | ENST00000459479 | 64 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RN7SL717P-201 | ENST00000478343 | 297 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC083795.1-201 | ENST00000491760 | 320 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC073172.2-201 | ENST00000527770 | 571 nt | TSL 4 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | CASP1-212 | ENST00000531166 | 300 nt | TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | GTSCR1-201 | ENST00000582578 | 470 nt | TSL 3 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC008770.4-201 | ENST00000586394 | 468 nt | TSL 3 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC092070.2-201 | ENST00000597550 | 545 nt | TSL 4 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | Z84484.1-202 | ENST00000612718 | 60 nt | TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC024884.1-201 | ENST00000620583 | 399 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC069234.4-201 | ENST00000621276 | 412 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC097372.5-201 | ENST00000623665 | 376 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINC02246-205 | ENST00000627623 | 417 nt | TSL 5 BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | CYP3A51P-201 | ENST00000633513 | 256 nt | BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SATB1-209 | ENST00000454909 | 3755 nt | APPRIS P1 TSL 1 (best) BASIC | 9.51 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINC01920-201 | ENST00000441356 | 2528 nt | TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC022034.1-201 | ENST00000512867 | 2156 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ORC4-214 | ENST00000535373 | 6710 nt | APPRIS P1 TSL 5 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LGI1-228 | ENST00000637689 | 1802 nt | TSL 5 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | SGO1-AS1-203 | ENST00000455626 | 2041 nt | TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | TSPAN6-204 | ENST00000612152 | 3796 nt | TSL 5 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | XIAPP3-201 | ENST00000312918 | 795 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | Y_RNA.331-201 | ENST00000365267 | 102 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNU6-80P-201 | ENST00000384195 | 107 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | TRAJ48-201 | ENST00000390489 | 63 nt | APPRIS P1 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | RNU6-700P-201 | ENST00000391043 | 107 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | MIR1282-201 | ENST00000408865 | 101 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL030996.1-201 | ENST00000411430 | 235 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | HMGB3P24-201 | ENST00000433260 | 622 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC107072.1-201 | ENST00000449007 | 110 nt | TSL 3 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC005077.1-201 | ENST00000449226 | 375 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINC01952-202 | ENST00000450016 | 281 nt | TSL 3 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AL139099.1-201 | ENST00000497398 | 403 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC025458.1-201 | ENST00000506046 | 166 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AP005357.1-201 | ENST00000520749 | 476 nt | TSL 3 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC103726.2-201 | ENST00000523318 | 411 nt | TSL 2 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | GLYATL1P2-201 | ENST00000529451 | 510 nt | TSL 2 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | DEFB131B-201 | ENST00000530210 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AP002001.1-203 | ENST00000534002 | 267 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC110275.1-201 | ENST00000534420 | 623 nt | APPRIS P1 TSL 4 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ECT2L-205 | ENST00000541398 | 4483 nt | APPRIS P1 TSL 5 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINC01524-201 | ENST00000428009 | 4390 nt | TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | LINGO2-204 | ENST00000613945 | 2981 nt | APPRIS P1 TSL 5 BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC083843.3-201 | ENST00000623679 | 2186 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | NSD3-206 | ENST00000527502 | 4471 nt | TSL 1 (best) BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC093849.1-201 | ENST00000563631 | 2209 nt | BASIC | 9.5 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ESRRG-206 | ENST00000366938 | 5274 nt | APPRIS P1 TSL 1 (best) BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | AC233981.2-201 | ENST00000611524 | 1614 nt | BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | FCHSD2-201 | ENST00000311172 | 4340 nt | TSL 1 (best) BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ADAM29-203 | ENST00000445694 | 3244 nt | APPRIS P1 TSL 1 (best) BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | IGIP-201 | ENST00000333305 | 3458 nt | APPRIS P1 BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ZNF177-202 | ENST00000589262 | 1920 nt | APPRIS ALT2 TSL 2 BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ZNF528-203 | ENST00000391788 | 4209 nt | TSL 2 BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ZNF146-201 | ENST00000443387 | 3326 nt | APPRIS P1 TSL 1 (best) BASIC | 9.49 | □□□□□ -0.89 | | |
| APLP2 | Q06481 | ZNF615-204 | ENST00000594083 | 4020 nt | APPRIS ALT2 TSL 1 (best) BASIC | 9.49 | □□□□□ -0.89 | | |