Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL7L1P1-201ENST00000448259 785 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC073415.1-201ENST00000449240 153 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC093278.1-201ENST00000494700 600 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 RN7SL808P-201ENST00000496066 299 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 NDUFA5P12-201ENST00000503796 343 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 Y_RNA.675-201ENST00000516389 149 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 RN7SKP234-201ENST00000517173 224 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.26□□□□□ -1.73
CLRN1P58418 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 OR5BN1P-201ENST00000532955 829 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC023050.3-201ENST00000541142 333 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC128657.1-201ENST00000549459 145 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC079075.1-201ENST00000559543 878 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 OR7E18P-201ENST00000592589 702 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.26□□□□□ -1.73
CLRN1P58418 AC007497.1-201ENST00000610421 561 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC105429.2-201ENST00000610567 517 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 FAM27B-201ENST00000610601 213 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 AL136313.1-201ENST00000624804 202 ntBASIC4.26□□□□□ -1.73
CLRN1P58418 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CLRN1P58418 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.26□□□□□ -1.73
CLRN1P58418 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLRN1P58418 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLRN1P58418 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.26□□□□□ -1.73
CLRN1P58418 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
CLRN1P58418 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLRN1P58418 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLRN1P58418 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 OR4G1P-203ENST00000641984 1631 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 RNU6-511P-201ENST00000363496 107 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 AL080315.1-201ENST00000406055 466 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AL162578.1-201ENST00000406202 378 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.25□□□□□ -1.73
CLRN1P58418 RN7SKP125-201ENST00000410481 302 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC007390.1-201ENST00000415722 356 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.25□□□□□ -1.73
CLRN1P58418 FABP7P1-201ENST00000424004 391 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 MTATP6P16-201ENST00000434543 526 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 snoU109.4-201ENST00000458953 143 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 RNA5SP103-201ENST00000459503 118 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AL591473.1-201ENST00000464297 313 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 GMFBP1-201ENST00000467831 427 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 HMGB1P25-201ENST00000468402 607 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 RPL38P4-201ENST00000502376 214 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 BTF3P13-201ENST00000513224 490 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 RNU1-6P-201ENST00000516290 144 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 RNA5SP392-201ENST00000516905 112 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 HMGB1P41-201ENST00000520234 440 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC103843.2-201ENST00000530523 682 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC125611.2-201ENST00000551907 647 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC093249.4-201ENST00000564755 259 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.25□□□□□ -1.73
CLRN1P58418 MIR4795-201ENST00000584182 89 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC022726.1-201ENST00000587475 207 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC044792.1-201ENST00000593294 196 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC010591.1-201ENST00000603941 649 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC013553.2-201ENST00000604244 589 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC005858.4-201ENST00000623191 700 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.25□□□□□ -1.73
CLRN1P58418 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLRN1P58418 NXPH1-205ENST00000602349 1953 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 AL672167.1-205ENST00000641112 3080 ntBASIC4.25□□□□□ -1.73
CLRN1P58418 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.25□□□□□ -1.73
CLRN1P58418 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms