Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH4P55283 ZNF971P-201ENST00000562068 1249 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.14□□□□□ -1.91
CDH4P55283 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH4P55283 AC012669.1-201ENST00000603209 283 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
CDH4P55283 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 AL355810.1-201ENST00000614629 552 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AC091953.5-201ENST00000622919 233 ntBASIC3.14□□□□□ -1.91
CDH4P55283 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH4P55283 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.14□□□□□ -1.91
CDH4P55283 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH4P55283 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
CDH4P55283 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH4P55283 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 AL049780.3-201ENST00000624612 1583 ntBASIC3.13□□□□□ -1.91
CDH4P55283 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
CDH4P55283 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 RNU6-468P-201ENST00000384003 109 ntBASIC3.13□□□□□ -1.91
CDH4P55283 SNORA51.6-201ENST00000384151 125 ntBASIC3.13□□□□□ -1.91
CDH4P55283 U3.29-201ENST00000391296 212 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 GTF2IP23-201ENST00000423746 351 ntBASIC3.13□□□□□ -1.91
CDH4P55283 RPL7P46-201ENST00000425129 740 ntBASIC3.13□□□□□ -1.91
CDH4P55283 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC000041.1-201ENST00000439655 175 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 HMGB3P6-201ENST00000444896 598 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
CDH4P55283 MTND2P19-201ENST00000449129 1012 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC093392.2-201ENST00000450682 337 ntBASIC3.13□□□□□ -1.91
CDH4P55283 RPL23AP31-201ENST00000456160 467 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH4P55283 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 KLHL2P1-201ENST00000508691 521 ntBASIC3.13□□□□□ -1.91
CDH4P55283 RNU6-27P-201ENST00000516146 107 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 AP001317.1-201ENST00000531194 960 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC008127.2-201ENST00000549925 1075 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 SULT1C2P1-202ENST00000562418 459 ntBASIC3.13□□□□□ -1.91
CDH4P55283 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH4P55283 RPAP2P1-201ENST00000603626 1168 ntBASIC3.13□□□□□ -1.91
CDH4P55283 BNIP3P11-201ENST00000603878 563 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AC055876.5-201ENST00000605667 259 ntBASIC3.13□□□□□ -1.91
CDH4P55283 AP000238.1-201ENST00000608759 426 ntBASIC3.13□□□□□ -1.91
CDH4P55283 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH4P55283 AC008083.4-201ENST00000615076 444 ntBASIC3.13□□□□□ -1.91
CDH4P55283 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH4P55283 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH4P55283 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH4P55283 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH4P55283 SGO1P2-201ENST00000429458 1589 ntBASIC3.12□□□□□ -1.91
CDH4P55283 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH4P55283 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH4P55283 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH4P55283 DBF4P1-201ENST00000412976 1892 ntBASIC3.12□□□□□ -1.91
CDH4P55283 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH4P55283 RNU6-207P-201ENST00000384137 107 ntBASIC3.12□□□□□ -1.91
CDH4P55283 RNU1-101P-201ENST00000391171 127 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
CDH4P55283 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC092638.1-201ENST00000411966 1275 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH4P55283 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
CDH4P55283 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH4P55283 MTCYBP32-201ENST00000427945 1084 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AL512637.2-201ENST00000431287 1256 ntBASIC3.12□□□□□ -1.91
CDH4P55283 MTCYBP15-201ENST00000433123 1127 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC241584.1-201ENST00000438469 1241 ntBASIC3.12□□□□□ -1.91
CDH4P55283 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH4P55283 S100A11P2-201ENST00000467589 312 ntBASIC3.12□□□□□ -1.91
CDH4P55283 RPL21P18-201ENST00000469899 480 ntBASIC3.12□□□□□ -1.91
CDH4P55283 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH4P55283 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH4P55283 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH4P55283 POU5F1P7-201ENST00000508759 541 ntBASIC3.12□□□□□ -1.91
CDH4P55283 SNORA31.8-201ENST00000516327 108 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH4P55283 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.12□□□□□ -1.91
CDH4P55283 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH4P55283 EEF1B2P4-201ENST00000551398 348 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH4P55283 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH4P55283 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH4P55283 AP003973.1-201ENST00000604639 691 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC005000.2-201ENST00000605468 310 ntBASIC3.12□□□□□ -1.91
CDH4P55283 AC008962.1-201ENST00000605729 304 ntBASIC3.12□□□□□ -1.91
CDH4P55283 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms