Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RPL23AP52-201ENST00000439311 478 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 CALM1P1-201ENST00000442082 433 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 RPS27AP13-201ENST00000498403 237 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.52□□□□□ -1.53
PDE6BP35913 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 AC010486.1-201ENST00000511793 424 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.52□□□□□ -1.53
PDE6BP35913 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDE6BP35913 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.52□□□□□ -1.53
PDE6BP35913 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.52□□□□□ -1.53
PDE6BP35913 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 AC007151.1-201ENST00000572774 483 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 RN7SL600P-201ENST00000581811 299 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.52□□□□□ -1.53
PDE6BP35913 NRBF2P5-201ENST00000603087 788 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 MIR6867-201ENST00000610636 67 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.52□□□□□ -1.53
PDE6BP35913 MIR6891-201ENST00000618788 93 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 AC110994.2-201ENST00000635481 492 ntBASIC5.52□□□□□ -1.53
PDE6BP35913 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDE6BP35913 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDE6BP35913 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.52□□□□□ -1.53
PDE6BP35913 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDE6BP35913 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDE6BP35913 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
PDE6BP35913 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 SNORA51.2-201ENST00000364595 132 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RNA5SP513-201ENST00000364648 118 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.51□□□□□ -1.53
PDE6BP35913 AL450992.3-201ENST00000413192 568 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC004987.3-201ENST00000413879 771 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 SNRPEP10-201ENST00000420249 274 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 CYP4F29P-201ENST00000420685 446 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 EIF4HP2-201ENST00000424380 563 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 AC109583.1-201ENST00000432156 268 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RPL21P89-201ENST00000444021 467 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 AC104651.2-201ENST00000447549 528 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 SLC31A1P1-201ENST00000451221 567 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RPL26P28-201ENST00000451325 435 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 HMGN3P1-201ENST00000453847 193 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 C1DP4-201ENST00000455429 424 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RNU6-420P-201ENST00000458780 107 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 RPS20P20-201ENST00000460498 340 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RPS27AP17-201ENST00000463344 455 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RN7SL691P-201ENST00000494487 301 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC139783.2-201ENST00000504847 1145 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 AC026427.2-201ENST00000506228 536 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 RNU2-46P-201ENST00000517038 113 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 RNU1-45P-201ENST00000517191 141 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.51□□□□□ -1.53
PDE6BP35913 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.51□□□□□ -1.53
PDE6BP35913 TVP23BP1-201ENST00000557500 617 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 CYCSP40-201ENST00000575927 294 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC090312.1-201ENST00000580637 348 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 MIR4307-201ENST00000582802 84 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 BPIFA4P-203ENST00000603168 689 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AL136363.1-201ENST00000605349 337 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC116312.1-201ENST00000606841 314 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC010205.1-201ENST00000616668 449 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDE6BP35913 AL158801.5-201ENST00000623123 465 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 PISRT1-201ENST00000626175 531 ntBASIC5.51□□□□□ -1.53
PDE6BP35913 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDE6BP35913 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.51□□□□□ -1.53
PDE6BP35913 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PDE6BP35913 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDE6BP35913 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.5□□□□□ -1.53
PDE6BP35913 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDE6BP35913 MAPK10-320ENST00000641462 6696 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 OR51H2P-202ENST00000641424 3046 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 OR4A15-201ENST00000314706 1035 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 OR52B1P-201ENST00000316506 909 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 RNY3P3-201ENST00000363816 102 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 RNY4P34-201ENST00000364779 95 ntBASIC5.5□□□□□ -1.53
PDE6BP35913 RNU6-809P-201ENST00000384461 107 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms