Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 CR381572.1-201ENST00000625098 102 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC090897.3-201ENST00000636973 1157 ntBASIC2.72□□□□□ -1.97
RPA3P35244 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPA3P35244 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RPA3P35244 AP002907.1-201ENST00000606361 1430 ntBASIC2.71□□□□□ -1.98
RPA3P35244 MTND5P11-201ENST00000511037 1812 ntBASIC2.71□□□□□ -1.98
RPA3P35244 RNU6-7-201ENST00000364784 107 ntBASIC2.71□□□□□ -1.98
RPA3P35244 RNU6-8-201ENST00000365467 107 ntBASIC2.71□□□□□ -1.98
RPA3P35244 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 SNORA18.3-201ENST00000384122 132 ntBASIC2.71□□□□□ -1.98
RPA3P35244 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RPA3P35244 RNU6-796P-201ENST00000391086 107 ntBASIC2.71□□□□□ -1.98
RPA3P35244 SAR1AP2-201ENST00000392696 594 ntBASIC2.71□□□□□ -1.98
RPA3P35244 ATF1P1-201ENST00000406040 927 ntBASIC2.71□□□□□ -1.98
RPA3P35244 UBE2V1P11-201ENST00000411559 285 ntBASIC2.71□□□□□ -1.98
RPA3P35244 RPS20P25-201ENST00000412447 352 ntBASIC2.71□□□□□ -1.98
RPA3P35244 MTCO3P12-201ENST00000416718 547 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.71□□□□□ -1.98
RPA3P35244 RPP40P1-201ENST00000426762 456 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC096632.1-201ENST00000427395 310 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
RPA3P35244 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 AC112220.1-201ENST00000434628 355 ntBASIC2.71□□□□□ -1.98
RPA3P35244 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.71□□□□□ -1.98
RPA3P35244 MTND3P4-201ENST00000453537 303 ntBASIC2.71□□□□□ -1.98
RPA3P35244 BX248409.1-201ENST00000455497 255 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.71□□□□□ -1.98
RPA3P35244 AP001025.2-201ENST00000490908 477 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC026412.2-201ENST00000512270 1075 ntBASIC2.71□□□□□ -1.98
RPA3P35244 SNORD59.2-201ENST00000516873 68 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC090136.1-201ENST00000520009 240 ntBASIC2.71□□□□□ -1.98
RPA3P35244 HMGB1P41-201ENST00000520234 440 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.71□□□□□ -1.98
RPA3P35244 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 OR7K1P-201ENST00000546439 926 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.71□□□□□ -1.98
RPA3P35244 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.71□□□□□ -1.98
RPA3P35244 AP001029.3-201ENST00000588063 596 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AL160237.3-201ENST00000604114 1013 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AL160281.1-201ENST00000605307 311 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC016542.1-201ENST00000608259 493 ntBASIC2.71□□□□□ -1.98
RPA3P35244 AC092650.2-201ENST00000619984 902 ntBASIC2.71□□□□□ -1.98
RPA3P35244 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.71□□□□□ -1.98
RPA3P35244 AC097372.4-201ENST00000625025 466 ntBASIC2.71□□□□□ -1.98
RPA3P35244 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.71□□□□□ -1.98
RPA3P35244 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.71□□□□□ -1.98
RPA3P35244 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.7□□□□□ -1.98
RPA3P35244 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPA3P35244 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 AL356057.1-202ENST00000402263 756 ntBASIC2.7□□□□□ -1.98
RPA3P35244 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.7□□□□□ -1.98
RPA3P35244 RNU6-1077P-201ENST00000410506 102 ntBASIC2.7□□□□□ -1.98
RPA3P35244 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
RPA3P35244 MORF4L1P7-201ENST00000426038 703 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 AL513321.1-201ENST00000441175 761 ntBASIC2.7□□□□□ -1.98
RPA3P35244 RPS24P13-201ENST00000442520 397 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC007000.2-201ENST00000442564 487 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AL135938.1-201ENST00000443141 297 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.7□□□□□ -1.98
RPA3P35244 AL034418.1-201ENST00000448675 860 ntBASIC2.7□□□□□ -1.98
RPA3P35244 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.7□□□□□ -1.98
RPA3P35244 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.7□□□□□ -1.98
RPA3P35244 HIGD1AP13-201ENST00000509878 289 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC105914.1-201ENST00000511798 226 ntBASIC2.7□□□□□ -1.98
RPA3P35244 RNA5SP367-201ENST00000516557 118 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC022690.1-201ENST00000526681 550 ntBASIC2.7□□□□□ -1.98
RPA3P35244 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.7□□□□□ -1.98
RPA3P35244 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.7□□□□□ -1.98
RPA3P35244 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.7□□□□□ -1.98
RPA3P35244 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.7□□□□□ -1.98
RPA3P35244 DPRXP5-201ENST00000604662 539 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC006386.2-201ENST00000624491 75 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC012005.1-201ENST00000624575 75 ntBASIC2.7□□□□□ -1.98
RPA3P35244 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RPA3P35244 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPA3P35244 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
RPA3P35244 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPA3P35244 MAPK10-322ENST00000641485 4530 ntBASIC2.7□□□□□ -1.98
RPA3P35244 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
RPA3P35244 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPA3P35244 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.69□□□□□ -1.98
RPA3P35244 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPA3P35244 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms