Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AL451074.3-201ENST00000437709 472 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 MUPP-201ENST00000438111 566 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 AC017007.3-201ENST00000479865 435 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRMP28827 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRMP28827 AC105137.2-201ENST00000569073 466 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPRMP28827 AC091834.1-201ENST00000614543 472 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRMP28827 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRMP28827 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRMP28827 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRMP28827 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRMP28827 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRMP28827 AC010733.2-201ENST00000589496 5702 ntBASIC3.17□□□□□ -1.9
PTPRMP28827 AC245100.2-201ENST00000454544 1679 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPRMP28827 RNA5SP190-201ENST00000365222 118 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRMP28827 AC093151.1-201ENST00000427711 313 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 GAPDHP27-201ENST00000447427 1020 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 RPS27P27-201ENST00000498779 255 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 SNORA70.14-201ENST00000516205 110 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 HMGB1P1-201ENST00000522557 636 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPRMP28827 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPRMP28827 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRMP28827 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRMP28827 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
PTPRMP28827 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 HMGB1P11-201ENST00000413899 637 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPRMP28827 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRMP28827 RMST_2.1-201ENST00000617263 136 ntBASIC3.16□□□□□ -1.9
PTPRMP28827 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.15□□□□□ -1.9
PTPRMP28827 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTPRMP28827 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRMP28827 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRMP28827 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRMP28827 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRMP28827 FRG1BP-201ENST00000278882 761 ntBASIC3.15□□□□□ -1.91
PTPRMP28827 RNU6-707P-201ENST00000364647 95 ntBASIC3.15□□□□□ -1.91
PTPRMP28827 snoZ278.1-201ENST00000517059 112 ntBASIC3.15□□□□□ -1.91
PTPRMP28827 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRMP28827 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.15□□□□□ -1.91
PTPRMP28827 MIR3683-201ENST00000580847 82 ntBASIC3.15□□□□□ -1.91
PTPRMP28827 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPRMP28827 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRMP28827 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPRMP28827 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRMP28827 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.14□□□□□ -1.91
PTPRMP28827 MIR613-201ENST00000385248 95 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 AL139156.1-201ENST00000412785 841 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 SNRPFP2-201ENST00000440710 251 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 CEACAMP4-201ENST00000457676 421 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRMP28827 AL356280.1-201ENST00000603614 379 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 AL645944.1-201ENST00000603857 493 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 MIR6504-201ENST00000613520 61 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRMP28827 AC084035.1-201ENST00000634543 607 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 AC008432.1-201ENST00000615912 1320 ntBASIC3.14□□□□□ -1.91
PTPRMP28827 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRMP28827 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTPRMP28827 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTPRMP28827 PNPT1P2-201ENST00000456768 2050 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AL136964.1-201ENST00000622038 2990 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRMP28827 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRMP28827 RPS24P8-201ENST00000431490 402 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRMP28827 TVP23BP2-201ENST00000455082 615 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.13□□□□□ -1.91
PTPRMP28827 RNU7-157P-201ENST00000459600 66 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 MLLT10P2-201ENST00000506434 249 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AC025881.1-201ENST00000518851 512 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AC009831.4-201ENST00000620744 325 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 MIR6132-201ENST00000622083 109 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 AC091953.2-201ENST00000623979 160 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 LRRC77P-213ENST00000637727 880 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 RLIMP2-201ENST00000427891 1563 ntBASIC3.13□□□□□ -1.91
PTPRMP28827 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRMP28827 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRMP28827 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTPRMP28827 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRMP28827 OR5H15-201ENST00000383696 930 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 SNORA51.11-201ENST00000384442 131 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 AIMP1P1-201ENST00000418670 937 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 RPL36AP6-201ENST00000435770 321 ntBASIC3.12□□□□□ -1.91
PTPRMP28827 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.12□□□□□ -1.91
PTPRMP28827 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.12□□□□□ -1.91
PTPRMP28827 RN7SKP234-201ENST00000517173 224 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms