Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AP000860.1-201ENST00000605250 559 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AC103710.2-201ENST00000609912 942 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AL022401.1-201ENST00000619498 108 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AC091953.3-201ENST00000623220 236 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL442639.1-201ENST00000625030 1899 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 GABPAP-201ENST00000419271 1356 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 RNU6-511P-201ENST00000363496 107 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 RNU6-259P-201ENST00000383999 107 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 RNA5SP87-201ENST00000384155 118 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 RPL31P35-201ENST00000431058 377 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 RPL7AP28-201ENST00000464513 571 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 RPS3AP17-201ENST00000472594 777 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC010631.1-201ENST00000474150 156 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AP001086.1-201ENST00000494882 321 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC025164.1-201ENST00000496249 478 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 RNU6-720P-201ENST00000516363 108 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC055876.1-202ENST00000567053 138 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC010546.1-201ENST00000569391 485 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.05□□□□□ -1.76
TNFSF4P23510 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 MIR98-201ENST00000606724 119 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 SDR42E1P2-201ENST00000614861 481 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC010133.1-201ENST00000615809 842 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC015914.2-201ENST00000618167 288 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFSF4P23510 AC055839.1-201ENST00000634467 498 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 AC073869.10-201ENST00000642016 354 ntBASIC4.05□□□□□ -1.76
TNFSF4P23510 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFSF4P23510 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFSF4P23510 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFSF4P23510 MAPK10-303ENST00000641324 3959 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFSF4P23510 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TNFSF4P23510 HSPE1P11-201ENST00000339579 310 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFSF4P23510 RNU1-82P-201ENST00000390851 165 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AL121834.1-202ENST00000404494 277 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AL359634.1-202ENST00000404721 284 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 RPL23AP48-201ENST00000406913 488 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 U3.35-201ENST00000408405 208 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF4P23510 AC018630.2-202ENST00000422992 927 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC007283.2-201ENST00000424739 197 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC133104.1-201ENST00000429100 218 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFSF4P23510 CYCSP43-201ENST00000438233 310 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 TXNP1-201ENST00000441872 371 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AL662791.1-201ENST00000441992 928 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 MTCO3P20-201ENST00000454926 688 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFSF4P23510 SNORD97-201ENST00000459187 142 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 AC104763.1-201ENST00000475274 360 ntBASIC4.04□□□□□ -1.76
TNFSF4P23510 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms