Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC125257.1-201ENST00000560400 2930 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LMNB1P20700 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LMNB1P20700 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.7□□□□□ -1.5
LMNB1P20700 AL451142.2-201ENST00000429076 2090 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LMNB1P20700 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LMNB1P20700 RNU6-223P-201ENST00000362830 107 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 RNA5SP387-201ENST00000364226 106 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 Y_RNA.234-201ENST00000364409 97 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 RNU6-108P-201ENST00000365558 107 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 Z98745.1-201ENST00000402553 494 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 RPL21P67-201ENST00000402896 478 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 MTCO3P12-201ENST00000416718 547 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 RPS15AP12-201ENST00000419498 388 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC119618.1-201ENST00000434191 222 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 RPL23AP93-201ENST00000440847 484 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.7□□□□□ -1.5
LMNB1P20700 RNU6-261P-201ENST00000459506 102 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 AC055855.1-201ENST00000489563 579 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 AC093767.1-201ENST00000504523 156 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC024224.1-201ENST00000538284 609 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC078814.3-201ENST00000553036 491 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC005498.1-201ENST00000592125 465 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 DISC2.1-201ENST00000612827 205 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 AC112204.3-201ENST00000623822 332 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC100810.6-201ENST00000638068 285 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LMNB1P20700 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
LMNB1P20700 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.7□□□□□ -1.5
LMNB1P20700 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 AL022322.2-201ENST00000624072 20397 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.7□□□□□ -1.5
LMNB1P20700 AC097714.1-201ENST00000511272 1647 ntBASIC5.7□□□□□ -1.5
LMNB1P20700 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LMNB1P20700 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LMNB1P20700 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 AC011755.1-201ENST00000623763 2049 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LMNB1P20700 AC021146.4-201ENST00000309229 279 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 Y_RNA.58-201ENST00000362807 102 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 Y_RNA.154-201ENST00000363624 102 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 RNU6-1243P-201ENST00000364028 107 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 RNY3P1-201ENST00000365085 102 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 RNY3-201ENST00000365484 102 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LMNB1P20700 Y_RNA.490-201ENST00000384413 102 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 RNU2-21P-201ENST00000410368 188 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 RNU6-1148P-201ENST00000410992 104 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.69□□□□□ -1.5
LMNB1P20700 TMSB10P2-201ENST00000416049 131 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.69□□□□□ -1.5
LMNB1P20700 ELOCP4-201ENST00000420090 333 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AC012065.2-201ENST00000421295 375 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 AL353678.1-201ENST00000422735 741 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 COX6CP15-201ENST00000426313 211 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 PSMA6P3-201ENST00000428242 164 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 HMGB1P15-201ENST00000453854 435 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 AC104057.1-201ENST00000515547 497 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 AP000907.2-201ENST00000530827 353 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.69□□□□□ -1.5
LMNB1P20700 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.69□□□□□ -1.5
LMNB1P20700 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.69□□□□□ -1.5
LMNB1P20700 RPL23AP92-201ENST00000603609 255 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AC022106.2-201ENST00000620114 757 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 AC104623.2-202ENST00000623477 4002 ntBASIC5.69□□□□□ -1.5
LMNB1P20700 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
LMNB1P20700 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms