Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MTND2P41-201ENST00000637599 773 ntBASIC2.43□□□□□ -2.02
CD28P10747 AC006927.2-201ENST00000639256 389 ntBASIC2.43□□□□□ -2.02
CD28P10747 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CD28P10747 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.43□□□□□ -2.02
CD28P10747 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CD28P10747 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CD28P10747 AC244517.1-201ENST00000606030 2086 ntBASIC2.43□□□□□ -2.02
CD28P10747 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.43□□□□□ -2.02
CD28P10747 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CD28P10747 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CD28P10747 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CD28P10747 SNORD56.3-201ENST00000363507 71 ntBASIC2.42□□□□□ -2.02
CD28P10747 RNU5B-4P-201ENST00000363508 111 ntBASIC2.42□□□□□ -2.02
CD28P10747 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CD28P10747 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CD28P10747 Y_RNA.500-201ENST00000384466 111 ntBASIC2.42□□□□□ -2.02
CD28P10747 Y_RNA.510-201ENST00000384511 114 ntBASIC2.42□□□□□ -2.02
CD28P10747 U3.29-201ENST00000391296 212 ntBASIC2.42□□□□□ -2.02
CD28P10747 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CD28P10747 AC092634.6-201ENST00000418558 192 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 RPS6P14-201ENST00000425165 719 ntBASIC2.42□□□□□ -2.02
CD28P10747 RAC1P8-201ENST00000427086 527 ntBASIC2.42□□□□□ -2.02
CD28P10747 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.42□□□□□ -2.02
CD28P10747 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.42□□□□□ -2.02
CD28P10747 HMGB3P11-201ENST00000440127 604 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 AC016696.1-201ENST00000446949 318 ntBASIC2.42□□□□□ -2.02
CD28P10747 Z99127.3-201ENST00000448158 395 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.42□□□□□ -2.02
CD28P10747 NDUFA5P7-201ENST00000452914 242 ntBASIC2.42□□□□□ -2.02
CD28P10747 HMGB1P25-201ENST00000468402 607 ntBASIC2.42□□□□□ -2.02
CD28P10747 UBE2DNL-203ENST00000474922 222 ntBASIC2.42□□□□□ -2.02
CD28P10747 RPS27AP1-201ENST00000475545 471 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC021205.2-201ENST00000480069 347 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC108078.3-201ENST00000502633 489 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 AC010374.2-201ENST00000512933 535 ntBASIC2.42□□□□□ -2.02
CD28P10747 AP003066.2-201ENST00000529375 555 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC087481.2-201ENST00000565492 330 ntBASIC2.42□□□□□ -2.02
CD28P10747 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.42□□□□□ -2.02
CD28P10747 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.42□□□□□ -2.02
CD28P10747 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.42□□□□□ -2.02
CD28P10747 AP000238.1-201ENST00000608759 426 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.42□□□□□ -2.02
CD28P10747 AC139713.2-210ENST00000641741 992 ntBASIC2.42□□□□□ -2.02
CD28P10747 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CD28P10747 AC004925.1-201ENST00000624256 2706 ntBASIC2.42□□□□□ -2.02
CD28P10747 NUP58P1-201ENST00000502546 1738 ntBASIC2.42□□□□□ -2.02
CD28P10747 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CD28P10747 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CD28P10747 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.42□□□□□ -2.02
CD28P10747 AC000403.1-201ENST00000613696 3585 ntBASIC2.41□□□□□ -2.02
CD28P10747 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.41□□□□□ -2.02
CD28P10747 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CD28P10747 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.41□□□□□ -2.02
CD28P10747 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 AC111188.2-201ENST00000529697 1387 ntBASIC2.41□□□□□ -2.02
CD28P10747 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
CD28P10747 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 SUGT1P1-201ENST00000379514 476 ntBASIC2.41□□□□□ -2.02
CD28P10747 SNORA51.6-201ENST00000384151 125 ntBASIC2.41□□□□□ -2.02
CD28P10747 SNORA54-201ENST00000384281 123 ntBASIC2.41□□□□□ -2.02
CD28P10747 AL024474.1-201ENST00000404655 591 ntBASIC2.41□□□□□ -2.02
CD28P10747 RNU4-78P-201ENST00000410940 126 ntBASIC2.41□□□□□ -2.02
CD28P10747 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 AC099677.1-201ENST00000420575 175 ntBASIC2.41□□□□□ -2.02
CD28P10747 AL035410.1-201ENST00000427409 427 ntBASIC2.41□□□□□ -2.02
CD28P10747 MTCYBP32-201ENST00000427945 1084 ntBASIC2.41□□□□□ -2.02
CD28P10747 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.41□□□□□ -2.02
CD28P10747 AC236972.1-201ENST00000433225 199 ntBASIC2.41□□□□□ -2.02
CD28P10747 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CD28P10747 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.41□□□□□ -2.02
CD28P10747 ISCA1P2-201ENST00000438679 421 ntBASIC2.41□□□□□ -2.02
CD28P10747 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.41□□□□□ -2.02
CD28P10747 ARPC3P2-201ENST00000457786 533 ntBASIC2.41□□□□□ -2.02
CD28P10747 AC084024.2-201ENST00000503480 791 ntBASIC2.41□□□□□ -2.02
CD28P10747 KCTD9P5-201ENST00000504141 1170 ntBASIC2.41□□□□□ -2.02
CD28P10747 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD28P10747 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.41□□□□□ -2.02
CD28P10747 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 AC092451.2-201ENST00000538746 658 ntBASIC2.41□□□□□ -2.02
CD28P10747 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.41□□□□□ -2.02
CD28P10747 GAS5-AS1-201ENST00000602767 694 ntBASIC2.41□□□□□ -2.02
CD28P10747 XIAPP1-201ENST00000603162 600 ntBASIC2.41□□□□□ -2.02
CD28P10747 AL033523.1-201ENST00000605153 153 ntBASIC2.41□□□□□ -2.02
CD28P10747 AC128687.1-201ENST00000605304 619 ntBASIC2.41□□□□□ -2.02
CD28P10747 AC008083.4-201ENST00000615076 444 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms