Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.75□□□□□ -1.97
UBCP0CG48 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.75□□□□□ -1.97
UBCP0CG48 AL049781.1-201ENST00000623195 3585 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 MIR217-201ENST00000384817 110 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 ARF4P3-201ENST00000397387 509 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 MIR1289-1-201ENST00000408836 144 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 BX323014.1-201ENST00000412876 237 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AL137014.1-201ENST00000420490 1226 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 RPL27AP8-201ENST00000424277 446 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 RPL23AP58-201ENST00000440453 469 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 RFC5P1-201ENST00000454419 874 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 BOLA3P3-201ENST00000505182 232 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC021678.1-201ENST00000505195 936 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.74□□□□□ -1.97
UBCP0CG48 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 RN7SKP43-201ENST00000516173 320 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 RNU1-45P-201ENST00000517191 141 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UBCP0CG48 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.74□□□□□ -1.97
UBCP0CG48 AC068339.2-201ENST00000534395 618 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.74□□□□□ -1.97
UBCP0CG48 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.74□□□□□ -1.97
UBCP0CG48 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.74□□□□□ -1.97
UBCP0CG48 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 AC093227.2-201ENST00000589357 285 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AP003973.1-201ENST00000604639 691 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC009464.1-201ENST00000615731 469 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 AC080188.3-201ENST00000624842 748 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 TAB3P1-202ENST00000452645 1634 ntBASIC2.74□□□□□ -1.97
UBCP0CG48 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
UBCP0CG48 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
UBCP0CG48 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.73□□□□□ -1.97
UBCP0CG48 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBCP0CG48 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBCP0CG48 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.73□□□□□ -1.97
UBCP0CG48 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBCP0CG48 RNU6-354P-201ENST00000383862 107 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 RNU6-610P-201ENST00000384264 107 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 RNU6-878P-201ENST00000384578 110 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 RNU6-882P-201ENST00000391025 103 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 TAF9BP1-201ENST00000396646 746 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UBCP0CG48 AL355615.1-201ENST00000406187 641 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 PTGES3P2-201ENST00000407942 482 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 RPL7P10-201ENST00000417407 739 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 MTCO3P1-205ENST00000422088 832 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 Z93242.1-201ENST00000427102 353 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 NDUFB4P6-201ENST00000436819 366 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 MOB1AP2-201ENST00000446060 614 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 RPS29P12-201ENST00000460178 152 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.73□□□□□ -1.97
UBCP0CG48 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
UBCP0CG48 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.73□□□□□ -1.97
UBCP0CG48 SNORA48.10-201ENST00000516965 160 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.73□□□□□ -1.97
UBCP0CG48 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UBCP0CG48 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.73□□□□□ -1.97
UBCP0CG48 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 AC090502.2-201ENST00000549267 280 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 SETP7-201ENST00000552169 453 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC011611.1-201ENST00000552179 197 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 ZNF971P-201ENST00000562068 1249 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AL157394.1-201ENST00000562983 1224 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC106785.1-201ENST00000565935 262 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.73□□□□□ -1.97
UBCP0CG48 AC098483.2-201ENST00000603158 454 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.73□□□□□ -1.97
UBCP0CG48 AP002826.1-201ENST00000608835 315 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
UBCP0CG48 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.73□□□□□ -1.97
UBCP0CG48 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.73□□□□□ -1.97
UBCP0CG48 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.73□□□□□ -1.97
UBCP0CG48 RNU1-33P-201ENST00000364249 162 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 AL035405.1-201ENST00000400795 710 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 RNU2-28P-201ENST00000410457 189 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 AC108734.1-201ENST00000439549 399 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 Z95327.1-201ENST00000446082 482 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.72□□□□□ -1.97
UBCP0CG48 AC034236.1-201ENST00000469891 373 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 AC013828.1-201ENST00000481845 158 ntBASIC2.72□□□□□ -1.97
UBCP0CG48 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.72□□□□□ -1.97
UBCP0CG48 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.72□□□□□ -1.97
UBCP0CG48 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.72□□□□□ -1.97
UBCP0CG48 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
UBCP0CG48 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms