Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
SNRPA1P09661 RNA5SP51-201ENST00000364750 119 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 Y_RNA.554-201ENST00000384672 102 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 RPL7P60-201ENST00000397636 735 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC008280.1-201ENST00000418851 412 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.87□□□□□ -1.63
SNRPA1P09661 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.87□□□□□ -1.63
SNRPA1P09661 HMGN2P31-201ENST00000432430 273 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 LSM1P1-201ENST00000438629 273 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.87□□□□□ -1.63
SNRPA1P09661 USP9YP12-201ENST00000450481 570 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 IFNWP4-201ENST00000453148 294 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AL033528.1-201ENST00000453780 140 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.87□□□□□ -1.63
SNRPA1P09661 AC017015.1-201ENST00000477387 286 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC004924.1-201ENST00000480160 781 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.87□□□□□ -1.63
SNRPA1P09661 RPL9P6-201ENST00000492764 598 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.87□□□□□ -1.63
SNRPA1P09661 AC021678.1-201ENST00000505195 936 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC104619.4-201ENST00000510773 249 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.87□□□□□ -1.63
SNRPA1P09661 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.87□□□□□ -1.63
SNRPA1P09661 IGKV2D-19-201ENST00000523346 262 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.87□□□□□ -1.63
SNRPA1P09661 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.87□□□□□ -1.63
SNRPA1P09661 BNIP3P30-201ENST00000601184 574 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 HSPE1P14-201ENST00000605812 302 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.87□□□□□ -1.63
SNRPA1P09661 AC131902.3-201ENST00000611767 581 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 U4.5-201ENST00000617137 123 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.87□□□□□ -1.63
SNRPA1P09661 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SNRPA1P09661 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNRPA1P09661 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.87□□□□□ -1.63
SNRPA1P09661 DCAF13P1-201ENST00000495256 1330 ntBASIC4.87□□□□□ -1.63
SNRPA1P09661 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SNRPA1P09661 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SNRPA1P09661 RNY3P14-201ENST00000384309 102 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 SOD2P1-201ENST00000396543 562 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC009965.2-201ENST00000425328 970 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 ISCA1P1-201ENST00000426679 387 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 NPM1P24-201ENST00000428039 894 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 NEK4P1-201ENST00000433383 879 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 PAXBP1P1-201ENST00000449315 447 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC239809.1-201ENST00000450470 217 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 LARP1BP2-201ENST00000486594 519 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC114981.1-201ENST00000503897 678 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC116353.2-201ENST00000505332 712 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 RNU6-314P-201ENST00000516574 104 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 RN7SKP96-201ENST00000516948 297 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AP004247.1-201ENST00000531556 1289 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.86□□□□□ -1.63
SNRPA1P09661 SULT1C2P1-202ENST00000562418 459 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 MIR4716-201ENST00000579628 84 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.86□□□□□ -1.63
SNRPA1P09661 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.86□□□□□ -1.63
SNRPA1P09661 BNIP3P8-201ENST00000597863 560 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 SNORA62.6-201ENST00000606322 83 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC090517.2-201ENST00000614966 680 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 AC008250.2-201ENST00000615261 205 ntBASIC4.86□□□□□ -1.63
SNRPA1P09661 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.86□□□□□ -1.63
SNRPA1P09661 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SNRPA1P09661 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SNRPA1P09661 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.86□□□□□ -1.63
SNRPA1P09661 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
SNRPA1P09661 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNRPA1P09661 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNRPA1P09661 RNA5SP387-201ENST00000364226 106 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms