Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.79□□□□□ -1.96
APOEP02649 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOEP02649 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOEP02649 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.78□□□□□ -1.96
APOEP02649 Y_RNA.493-201ENST00000384422 102 ntBASIC2.78□□□□□ -1.96
APOEP02649 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.78□□□□□ -1.96
APOEP02649 AC233728.2-201ENST00000425348 757 ntBASIC2.78□□□□□ -1.96
APOEP02649 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
APOEP02649 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.78□□□□□ -1.96
APOEP02649 AP000705.1-201ENST00000454567 350 ntBASIC2.78□□□□□ -1.96
APOEP02649 AC027673.1-201ENST00000456245 405 ntBASIC2.78□□□□□ -1.96
APOEP02649 RPS23P3-201ENST00000470993 430 ntBASIC2.78□□□□□ -1.96
APOEP02649 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.78□□□□□ -1.96
APOEP02649 C1DP5-201ENST00000525775 383 ntBASIC2.78□□□□□ -1.96
APOEP02649 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.78□□□□□ -1.96
APOEP02649 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
APOEP02649 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.78□□□□□ -1.96
APOEP02649 MIR3670-2-201ENST00000582974 65 ntBASIC2.78□□□□□ -1.96
APOEP02649 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
APOEP02649 MIR3670-1-201ENST00000584160 65 ntBASIC2.78□□□□□ -1.96
APOEP02649 MIR3670-3-201ENST00000584855 65 ntBASIC2.78□□□□□ -1.96
APOEP02649 AC008687.2-201ENST00000597865 520 ntBASIC2.78□□□□□ -1.96
APOEP02649 MIR3670-4-201ENST00000612260 65 ntBASIC2.78□□□□□ -1.96
APOEP02649 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.78□□□□□ -1.96
APOEP02649 AP003485.2-201ENST00000623636 610 ntBASIC2.78□□□□□ -1.96
APOEP02649 AC010297.1-201ENST00000623948 149 ntBASIC2.78□□□□□ -1.96
APOEP02649 FO624990.1-201ENST00000636373 85 ntBASIC2.78□□□□□ -1.96
APOEP02649 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
APOEP02649 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOEP02649 AL512646.1-201ENST00000269395 1077 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC062016.1-201ENST00000355719 319 ntBASIC2.77□□□□□ -1.97
APOEP02649 MIR7-1-201ENST00000384871 110 ntBASIC2.77□□□□□ -1.97
APOEP02649 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
APOEP02649 RNU4-65P-201ENST00000410473 140 ntBASIC2.77□□□□□ -1.97
APOEP02649 VTA1P1-201ENST00000414044 866 ntBASIC2.77□□□□□ -1.97
APOEP02649 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
APOEP02649 AL445669.2-201ENST00000454425 421 ntBASIC2.77□□□□□ -1.97
APOEP02649 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 snoU13.4-201ENST00000458916 104 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC006445.2-201ENST00000510061 472 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC133963.2-201ENST00000513686 578 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC096725.1-201ENST00000514266 313 ntBASIC2.77□□□□□ -1.97
APOEP02649 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.77□□□□□ -1.97
APOEP02649 AC022690.1-201ENST00000526681 550 ntBASIC2.77□□□□□ -1.97
APOEP02649 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.77□□□□□ -1.97
APOEP02649 HMGB1P6-201ENST00000569046 646 ntBASIC2.77□□□□□ -1.97
APOEP02649 MIR4446-201ENST00000578505 67 ntBASIC2.77□□□□□ -1.97
APOEP02649 COX6CP3-201ENST00000580869 223 ntBASIC2.77□□□□□ -1.97
APOEP02649 AC092474.3-201ENST00000603022 568 ntBASIC2.77□□□□□ -1.97
APOEP02649 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
APOEP02649 AP003122.6-201ENST00000623831 495 ntBASIC2.77□□□□□ -1.97
APOEP02649 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.77□□□□□ -1.97
APOEP02649 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.77□□□□□ -1.97
APOEP02649 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
APOEP02649 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOEP02649 NACA3P-201ENST00000359690 648 ntBASIC2.76□□□□□ -1.97
APOEP02649 CD24P4-201ENST00000382840 243 ntBASIC2.76□□□□□ -1.97
APOEP02649 MIR196B-201ENST00000384852 84 ntBASIC2.76□□□□□ -1.97
APOEP02649 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
APOEP02649 MT-TC-201ENST00000387405 66 ntBASIC2.76□□□□□ -1.97
APOEP02649 RNU6-837P-201ENST00000391056 108 ntBASIC2.76□□□□□ -1.97
APOEP02649 RNU2-52P-201ENST00000410680 190 ntBASIC2.76□□□□□ -1.97
APOEP02649 NUP35P1-201ENST00000422734 947 ntBASIC2.76□□□□□ -1.97
APOEP02649 MTATP6P4-201ENST00000427725 675 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.76□□□□□ -1.97
APOEP02649 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOEP02649 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.76□□□□□ -1.97
APOEP02649 AC004865.1-201ENST00000442276 1003 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC097499.1-201ENST00000444277 208 ntBASIC2.76□□□□□ -1.97
APOEP02649 AP000936.2-201ENST00000447151 681 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.76□□□□□ -1.97
APOEP02649 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.76□□□□□ -1.97
APOEP02649 HMGB1P46-201ENST00000520062 610 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.76□□□□□ -1.97
APOEP02649 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
APOEP02649 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.76□□□□□ -1.97
APOEP02649 AC087481.2-201ENST00000565492 330 ntBASIC2.76□□□□□ -1.97
APOEP02649 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.76□□□□□ -1.97
APOEP02649 XIAPP1-201ENST00000603162 600 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC103881.1-201ENST00000603476 538 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC135178.6-201ENST00000605314 398 ntBASIC2.76□□□□□ -1.97
APOEP02649 LINC00216-201ENST00000623548 1126 ntBASIC2.76□□□□□ -1.97
APOEP02649 AC092608.2-201ENST00000624427 218 ntBASIC2.76□□□□□ -1.97
APOEP02649 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
APOEP02649 SNORD21-201ENST00000383953 95 ntBASIC2.75□□□□□ -1.97
APOEP02649 MIR34A-201ENST00000385130 110 ntBASIC2.75□□□□□ -1.97
APOEP02649 RNA5SP56-201ENST00000410277 118 ntBASIC2.75□□□□□ -1.97
APOEP02649 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.75□□□□□ -1.97
APOEP02649 AL513175.2-201ENST00000422071 443 ntBASIC2.75□□□□□ -1.97
APOEP02649 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.75□□□□□ -1.97
APOEP02649 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.75□□□□□ -1.97
APOEP02649 RPL23AP74-201ENST00000437246 471 ntBASIC2.75□□□□□ -1.97
APOEP02649 RAD1P2-201ENST00000446414 663 ntBASIC2.75□□□□□ -1.97
APOEP02649 ST13P20-201ENST00000447996 1065 ntBASIC2.75□□□□□ -1.97
APOEP02649 RPL23AP31-201ENST00000456160 467 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms