Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE4BO95155 CYP3A51P-201ENST00000633513 256 ntBASIC3.49□□□□□ -1.85
UBE4BO95155 MFSD8-245ENST00000641743 948 ntBASIC3.49□□□□□ -1.85
UBE4BO95155 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE4BO95155 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE4BO95155 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
UBE4BO95155 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.49□□□□□ -1.85
UBE4BO95155 ZNF833P-201ENST00000424938 1494 ntBASIC3.49□□□□□ -1.85
UBE4BO95155 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 SUGT1P1-201ENST00000379514 476 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 MTND4P3-201ENST00000417829 541 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 RAC1P8-201ENST00000427086 527 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 OR2AS1P-201ENST00000427827 319 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 AL590103.1-201ENST00000434488 307 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC093155.1-201ENST00000440164 826 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 RPS12P18-201ENST00000442381 270 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AC125238.1-201ENST00000448842 249 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.48□□□□□ -1.85
UBE4BO95155 BTF3P5-201ENST00000457252 467 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC006390.1-201ENST00000508068 283 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC027309.2-201ENST00000520566 192 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 DEFB130C-202ENST00000530001 230 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC087481.2-201ENST00000565492 330 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AP001029.3-201ENST00000588063 596 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AC107294.3-201ENST00000609211 526 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.48□□□□□ -1.85
UBE4BO95155 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 MIR6852-201ENST00000621699 66 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AP003485.1-201ENST00000625093 753 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.48□□□□□ -1.85
UBE4BO95155 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE4BO95155 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE4BO95155 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.48□□□□□ -1.85
UBE4BO95155 AC091152.2-201ENST00000591628 2569 ntBASIC3.48□□□□□ -1.85
UBE4BO95155 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.48□□□□□ -1.85
UBE4BO95155 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBE4BO95155 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.48□□□□□ -1.85
UBE4BO95155 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
UBE4BO95155 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE4BO95155 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
UBE4BO95155 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
UBE4BO95155 RNA5SP295-201ENST00000362655 121 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 SNORA7.4-201ENST00000384249 137 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 MIR128-1-201ENST00000384921 82 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 SNORA48.2-201ENST00000390926 124 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AL079342.2-201ENST00000403367 482 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 HMGB3P23-201ENST00000414981 585 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AL049610.1-201ENST00000423374 372 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 USP9YP31-201ENST00000431405 881 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE4BO95155 RN7SL863P-201ENST00000462370 296 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC092757.1-201ENST00000467293 467 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 RPL23AP44-201ENST00000482216 473 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC069306.1-201ENST00000507006 843 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.47□□□□□ -1.85
UBE4BO95155 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.47□□□□□ -1.85
UBE4BO95155 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.47□□□□□ -1.85
UBE4BO95155 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.47□□□□□ -1.85
UBE4BO95155 AL606834.2-201ENST00000602954 668 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC006254.3-201ENST00000603353 884 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.47□□□□□ -1.85
UBE4BO95155 AC093673.2-201ENST00000609674 331 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 AP002371.2-201ENST00000624450 503 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
UBE4BO95155 AC004944.1-201ENST00000517807 3059 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
UBE4BO95155 MTND4P34-201ENST00000572715 1371 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
UBE4BO95155 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UBE4BO95155 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
UBE4BO95155 GNG5P1-201ENST00000255500 204 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 OR1S2-201ENST00000302592 978 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
UBE4BO95155 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.46□□□□□ -1.85
UBE4BO95155 RNU6-657P-201ENST00000383904 107 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 RPL23AP47-201ENST00000408017 460 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.46□□□□□ -1.85
UBE4BO95155 USP9YP21-201ENST00000420603 432 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.46□□□□□ -1.85
UBE4BO95155 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.46□□□□□ -1.85
UBE4BO95155 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.46□□□□□ -1.85
UBE4BO95155 NECAP1P2-201ENST00000455668 727 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 RPS27P29-201ENST00000463110 252 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 AP001486.1-201ENST00000463339 476 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 AC079203.1-201ENST00000487972 404 ntBASIC3.46□□□□□ -1.85
UBE4BO95155 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
UBE4BO95155 MLLT10P2-201ENST00000506434 249 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms