Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SNORD35B-201ENST00000363660 87 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 RNU6-853P-201ENST00000364306 107 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 Y_RNA.234-201ENST00000364409 97 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 SNORD116-4-201ENST00000384733 96 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AC069157.1-201ENST00000421749 137 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AC006366.1-201ENST00000422002 759 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.7□□□□□ -1.66
CTNND1O60716 AL513174.1-201ENST00000423182 629 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.7□□□□□ -1.66
CTNND1O60716 SKP1P1-201ENST00000438081 489 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 FAM103A2P-201ENST00000444122 354 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 USP9YP29-201ENST00000445112 563 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 NANOGP10-201ENST00000453325 895 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 SNRPFP4-201ENST00000456366 242 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 SNORD108-201ENST00000459332 71 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 HMGB1P25-201ENST00000468402 607 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 CBX3P3-201ENST00000508108 532 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.7□□□□□ -1.66
CTNND1O60716 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNND1O60716 RNA5SP179-201ENST00000517284 121 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 DEFB109D-201ENST00000529497 240 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 RFPL1S-203ENST00000539579 330 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.7□□□□□ -1.66
CTNND1O60716 TPMTP1-201ENST00000592307 737 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AC091167.4-201ENST00000605079 184 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 AC244100.1-202ENST00000621554 382 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNND1O60716 CRYM-AS1-204ENST00000637983 556 ntBASIC4.7□□□□□ -1.66
CTNND1O60716 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.7□□□□□ -1.66
CTNND1O60716 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTNND1O60716 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNND1O60716 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTNND1O60716 AP002001.2-201ENST00000529025 1469 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 MTND4P26-201ENST00000415971 1359 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 MAPK10-372ENST00000641954 3413 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 CCT4P2-201ENST00000233836 1548 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.69□□□□□ -1.66
CTNND1O60716 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 AC067945.1-201ENST00000342609 618 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 RNU6-1207P-201ENST00000384343 107 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 MIR93-201ENST00000385024 80 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 SNORA3.3-201ENST00000408712 125 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNND1O60716 CRYBB2P1-203ENST00000415709 538 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC245052.5-201ENST00000416320 649 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNND1O60716 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNND1O60716 MRPS18BP2-201ENST00000434310 759 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC091862.1-201ENST00000438016 1100 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.69□□□□□ -1.66
CTNND1O60716 MTCO1P42-201ENST00000457379 726 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 ST13P14-201ENST00000474095 734 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNND1O60716 AC022447.1-201ENST00000515358 464 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AP002963.1-201ENST00000530590 184 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.69□□□□□ -1.66
CTNND1O60716 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CTNND1O60716 SETP7-201ENST00000552169 453 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.69□□□□□ -1.66
CTNND1O60716 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.69□□□□□ -1.66
CTNND1O60716 MIR5697-201ENST00000578045 78 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC008638.3-201ENST00000603341 463 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 AC091965.4-201ENST00000607691 587 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CTNND1O60716 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.69□□□□□ -1.66
CTNND1O60716 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.69□□□□□ -1.66
CTNND1O60716 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CTNND1O60716 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CTNND1O60716 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTNND1O60716 AL356489.2-201ENST00000566968 3528 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.68□□□□□ -1.66
CTNND1O60716 AC090337.1-201ENST00000579651 2074 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTNND1O60716 RNU6-97P-201ENST00000363387 104 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 SNORD46.1-201ENST00000364139 104 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 U3.15-201ENST00000365398 212 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 RNU6-359P-201ENST00000365466 108 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 RNU6-837P-201ENST00000391056 108 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 RPS23P10-201ENST00000416185 486 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.68□□□□□ -1.66
CTNND1O60716 AIMP1P1-201ENST00000418670 937 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 YME1L1P1-201ENST00000429435 297 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 USP9YP12-201ENST00000450481 570 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 FABP3P2-201ENST00000453169 399 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 SSXP1-201ENST00000453640 473 ntBASIC4.68□□□□□ -1.66
CTNND1O60716 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.68□□□□□ -1.66
CTNND1O60716 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms