Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SAGE4P-201ENST00000442271 3381 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.61□□□□□ -1.51
GRIN3BO60391 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.61□□□□□ -1.51
GRIN3BO60391 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GRIN3BO60391 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GRIN3BO60391 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GRIN3BO60391 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
GRIN3BO60391 RNU6-845P-201ENST00000362578 103 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 RNU6-373P-201ENST00000411247 98 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 EEF1A1P40-201ENST00000412883 573 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AL445584.1-201ENST00000431451 330 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
GRIN3BO60391 SNORA40.12-201ENST00000516329 111 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC107934.1-201ENST00000522215 217 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC034105.3-201ENST00000565294 442 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 MIR4504-201ENST00000577413 92 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC018638.8-201ENST00000588755 281 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC013553.2-201ENST00000604244 589 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 AL355472.4-201ENST00000610233 626 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 DISC2.1-201ENST00000612827 205 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 uc_338.13-201ENST00000618243 179 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC012314.7-201ENST00000619693 93 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC024940.5-201ENST00000622889 474 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 AC000123.2-201ENST00000623124 461 ntBASIC5.61□□□□□ -1.51
GRIN3BO60391 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
GRIN3BO60391 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
GRIN3BO60391 AC093849.1-201ENST00000563631 2209 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC073346.2-201ENST00000624724 2058 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 Y_RNA.166-201ENST00000363730 102 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 RNU6-169P-201ENST00000365336 107 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GRIN3BO60391 RNU6-1226P-201ENST00000384317 107 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 Y_RNA.548-201ENST00000384656 105 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 E2F6P2-201ENST00000420708 748 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC119618.1-201ENST00000434191 222 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC016691.1-201ENST00000441321 413 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.6□□□□□ -1.51
GRIN3BO60391 HMGB1P15-201ENST00000453854 435 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 RPL30P11-201ENST00000495304 339 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC025164.1-201ENST00000496249 478 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 RPS27AP13-201ENST00000498403 237 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 MTCO3P9-201ENST00000506989 781 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC022616.3-201ENST00000523940 148 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 PDCD5P1-201ENST00000543528 309 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
GRIN3BO60391 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC125611.2-201ENST00000551907 647 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC093249.4-201ENST00000564755 259 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 HMGB1P6-201ENST00000569046 646 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC011471.1-201ENST00000585766 187 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.6□□□□□ -1.51
GRIN3BO60391 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 AC123786.2-201ENST00000603459 275 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 AL122125.1-201ENST00000616999 600 ntBASIC5.6□□□□□ -1.51
GRIN3BO60391 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
GRIN3BO60391 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
GRIN3BO60391 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GRIN3BO60391 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GRIN3BO60391 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 ADAM5-202ENST00000399789 1942 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms