Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MIR548I2-201ENST00000408348 149 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AC092809.3-201ENST00000415453 231 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 RPS15AP40-201ENST00000419621 391 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA2O43364 EI24P4-201ENST00000423683 1078 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA2O43364 EEF1B2P6-201ENST00000445713 673 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 REG1CP-206ENST00000447469 496 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 snoU109.4-201ENST00000458953 143 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 VN1R105P-201ENST00000486595 910 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 RNU6-390P-201ENST00000516259 103 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 Y_RNA.687-201ENST00000516558 91 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 RNU5B-3P-201ENST00000516601 115 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 RNU6-352P-201ENST00000516908 107 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 IGKV2-19-201ENST00000518132 283 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 ERHP1-201ENST00000523006 310 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AP006587.4-201ENST00000526053 529 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA2O43364 GSTP1P1-201ENST00000548078 319 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXA2O43364 AC007494.1-201ENST00000562293 760 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA2O43364 MIR1273E-201ENST00000581165 102 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 OR7E18P-201ENST00000592589 702 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AC123786.2-201ENST00000603459 275 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AC006363.1-201ENST00000603806 463 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXA2O43364 AC006023.2-201ENST00000609916 167 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 AL591516.1-201ENST00000611326 274 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXA2O43364 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA2O43364 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA2O43364 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXA2O43364 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HOXA2O43364 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA2O43364 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA2O43364 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA2O43364 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA2O43364 IRF5P1-201ENST00000504852 2164 ntBASIC6.33□□□□□ -1.4
HOXA2O43364 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA2O43364 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 AC093849.1-201ENST00000563631 2209 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 Y_RNA.48-201ENST00000362710 103 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 RNU6-662P-201ENST00000384253 104 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 Y_RNA.471-201ENST00000384312 102 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 MIR628-201ENST00000385229 95 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AL590704.1-201ENST00000402856 794 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 HMGA1P8-201ENST00000414130 321 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AL160275.3-201ENST00000423876 471 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA2O43364 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA2O43364 AL663074.2-201ENST00000440621 479 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AC023141.8-201ENST00000442554 208 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AL139109.1-201ENST00000455491 297 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 ACA64.4-201ENST00000459070 127 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA2O43364 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.32□□□□□ -1.4
HOXA2O43364 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA2O43364 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA2O43364 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 AL160281.1-201ENST00000605307 311 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 RNU6-85P-201ENST00000605989 107 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 AC009229.4-201ENST00000623854 1947 ntBASIC6.32□□□□□ -1.4
HOXA2O43364 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA2O43364 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA2O43364 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA2O43364 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.31□□□□□ -1.4
HOXA2O43364 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HOXA2O43364 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXA2O43364 RN7SKP124-201ENST00000364730 341 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 RNU6-1303P-201ENST00000364841 107 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 Y_RNA.297-201ENST00000364950 91 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 AC096921.1-201ENST00000411661 375 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 AC099336.2-201ENST00000422457 254 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 MYL8P-204ENST00000431574 518 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 CEACAMP6-201ENST00000452007 574 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 AC092647.2-201ENST00000452998 253 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 FRG2FP-204ENST00000453982 852 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 AC099560.2-201ENST00000457554 255 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXA2O43364 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXA2O43364 NDUFB5P1-201ENST00000508134 564 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 RN7SKP60-201ENST00000516985 239 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.31□□□□□ -1.4
HOXA2O43364 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.31□□□□□ -1.4
HOXA2O43364 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.31□□□□□ -1.4
HOXA2O43364 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.31□□□□□ -1.4
HOXA2O43364 AC067852.3-201ENST00000589177 561 ntBASIC6.31□□□□□ -1.4
HOXA2O43364 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.31□□□□□ -1.4
HOXA2O43364 AL355812.1-201ENST00000603215 216 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms