Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TO15178 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TO15178 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TO15178 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 UBE3AP2-201ENST00000429033 2259 ntBASIC3.61□□□□□ -1.83
TO15178 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
TO15178 AC244517.1-201ENST00000606030 2086 ntBASIC3.61□□□□□ -1.83
TO15178 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
TO15178 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
TO15178 AL031577.2-201ENST00000404133 280 ntBASIC3.61□□□□□ -1.83
TO15178 AL583834.1-201ENST00000406943 343 ntBASIC3.61□□□□□ -1.83
TO15178 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.61□□□□□ -1.83
TO15178 RN7SKP266-201ENST00000410232 287 ntBASIC3.61□□□□□ -1.83
TO15178 RNU6-628P-201ENST00000410675 107 ntBASIC3.61□□□□□ -1.83
TO15178 RN7SKP263-201ENST00000411194 309 ntBASIC3.61□□□□□ -1.83
TO15178 AC009237.5-201ENST00000414271 501 ntBASIC3.61□□□□□ -1.83
TO15178 Z97055.1-201ENST00000419730 712 ntBASIC3.61□□□□□ -1.83
TO15178 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.61□□□□□ -1.83
TO15178 AL117351.1-201ENST00000438864 766 ntBASIC3.61□□□□□ -1.83
TO15178 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.61□□□□□ -1.83
TO15178 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.61□□□□□ -1.83
TO15178 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
TO15178 RNU7-170P-201ENST00000459303 61 ntBASIC3.61□□□□□ -1.83
TO15178 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.61□□□□□ -1.83
TO15178 HMGB1P25-201ENST00000468402 607 ntBASIC3.61□□□□□ -1.83
TO15178 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
TO15178 RPS3AP43-201ENST00000479743 781 ntBASIC3.61□□□□□ -1.83
TO15178 RPS4XP15-201ENST00000489210 795 ntBASIC3.61□□□□□ -1.83
TO15178 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 POU5F1P7-201ENST00000508759 541 ntBASIC3.61□□□□□ -1.83
TO15178 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 Y_RNA.688-201ENST00000516565 95 ntBASIC3.61□□□□□ -1.83
TO15178 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.61□□□□□ -1.83
TO15178 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.61□□□□□ -1.83
TO15178 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.61□□□□□ -1.83
TO15178 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.61□□□□□ -1.83
TO15178 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.61□□□□□ -1.83
TO15178 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.61□□□□□ -1.83
TO15178 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 AC120057.2-201ENST00000571520 271 ntBASIC3.61□□□□□ -1.83
TO15178 AC053481.4-201ENST00000583164 216 ntBASIC3.61□□□□□ -1.83
TO15178 AL353997.4-201ENST00000586196 166 ntBASIC3.61□□□□□ -1.83
TO15178 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 AL606490.9-201ENST00000603331 271 ntBASIC3.61□□□□□ -1.83
TO15178 MIR6798-201ENST00000612887 67 ntBASIC3.61□□□□□ -1.83
TO15178 AL392048.1-201ENST00000613946 534 ntBASIC3.61□□□□□ -1.83
TO15178 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
TO15178 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TO15178 AC018755.4-201ENST00000619715 454 ntBASIC3.61□□□□□ -1.83
TO15178 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 AF117829.1-206ENST00000621883 3802 ntBASIC3.61□□□□□ -1.83
TO15178 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
TO15178 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TO15178 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
TO15178 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TO15178 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.6□□□□□ -1.83
TO15178 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 RNU6-50P-201ENST00000362356 103 ntBASIC3.6□□□□□ -1.83
TO15178 RNA5SP515-201ENST00000364570 118 ntBASIC3.6□□□□□ -1.83
TO15178 RNA5SP97-201ENST00000365006 84 ntBASIC3.6□□□□□ -1.83
TO15178 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 RNU6-629P-201ENST00000384061 103 ntBASIC3.6□□□□□ -1.83
TO15178 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TO15178 HMGB1P11-201ENST00000413899 637 ntBASIC3.6□□□□□ -1.83
TO15178 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.6□□□□□ -1.83
TO15178 AC245052.5-201ENST00000416320 649 ntBASIC3.6□□□□□ -1.83
TO15178 AC127526.1-201ENST00000417526 366 ntBASIC3.6□□□□□ -1.83
TO15178 AC090960.1-201ENST00000421072 306 ntBASIC3.6□□□□□ -1.83
TO15178 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.6□□□□□ -1.83
TO15178 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.6□□□□□ -1.83
TO15178 AL831737.1-201ENST00000441288 271 ntBASIC3.6□□□□□ -1.83
TO15178 RANP8-201ENST00000444720 713 ntBASIC3.6□□□□□ -1.83
TO15178 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.6□□□□□ -1.83
TO15178 BTF3P5-201ENST00000457252 467 ntBASIC3.6□□□□□ -1.83
TO15178 snoU13.8-201ENST00000458890 104 ntBASIC3.6□□□□□ -1.83
TO15178 AC106872.3-201ENST00000495104 446 ntBASIC3.6□□□□□ -1.83
TO15178 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.6□□□□□ -1.83
TO15178 AC112198.1-201ENST00000505369 1220 ntBASIC3.6□□□□□ -1.83
TO15178 AC093677.1-201ENST00000514414 678 ntBASIC3.6□□□□□ -1.83
TO15178 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
TO15178 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TO15178 OR5AP1P-201ENST00000529730 940 ntBASIC3.6□□□□□ -1.83
TO15178 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.6□□□□□ -1.83
TO15178 MIR4286-201ENST00000580651 93 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms