Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 CUL1P1-201ENST00000509510 2425 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 RNU6-339P-201ENST00000384310 107 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AL138827.1-201ENST00000402666 306 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 OR4K6P-201ENST00000416478 897 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 HMGN2P30-201ENST00000423237 256 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 MTND4P24-201ENST00000424002 397 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 ZNF965P-201ENST00000432501 817 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 PTP4A1P3-201ENST00000433661 420 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC105272.1-201ENST00000438604 198 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 RPS26P30-201ENST00000443431 335 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 Z96811.1-201ENST00000445880 108 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC026801.2-201ENST00000515352 425 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC104057.1-201ENST00000515547 497 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC125611.2-201ENST00000551907 647 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 NBEAP1-201ENST00000554452 979 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 EIF4BP1-201ENST00000554881 351 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 CYCSP39-201ENST00000565821 309 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC006116.7-201ENST00000590141 756 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC091057.2-201ENST00000602594 792 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 XIAPP1-201ENST00000603162 600 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC019159.1-201ENST00000605094 187 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 BX322635.1-201ENST00000605804 496 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC004775.1-201ENST00000607389 753 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 AC083865.1-201ENST00000636634 831 ntBASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV41A0A0B4J266 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC138915.1-201ENST00000565427 1685 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 ENSAP3-201ENST00000312710 333 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 RNU6-1005P-201ENST00000384519 107 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 U3.26-201ENST00000391236 204 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 HMGB3P31-201ENST00000413333 595 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 UBE2V1P5-201ENST00000440070 405 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 RPL39P40-201ENST00000445481 146 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 MTND2P6-201ENST00000455337 1030 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 RNA5SP310-201ENST00000459084 116 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 RPL21P131-201ENST00000497298 483 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 SNORA31.8-201ENST00000516327 108 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 SNORA31.21-201ENST00000517180 77 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 COX6CP8-201ENST00000522620 226 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC067805.1-201ENST00000559344 470 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC138761.3-201ENST00000579993 334 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AP001542.1-201ENST00000591314 200 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AL133507.1-201ENST00000605269 557 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC107871.2-201ENST00000612894 502 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 STMN1P1-201ENST00000617809 440 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 MIR6733-201ENST00000635723 61 ntBASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRAV41A0A0B4J266 AC099654.7-201ENST00000635788 2127 ntBASIC2.15□□□□□ -2.06
TRAV41A0A0B4J266 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP139-201ENST00000364340 117 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 SNORD115-48-201ENST00000364764 76 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP21-201ENST00000410917 96 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AL592148.1-201ENST00000413568 445 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC005189.1-201ENST00000431286 310 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC000041.1-201ENST00000439655 175 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AL590664.1-201ENST00000448065 339 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 DNAJC19P8-201ENST00000452887 259 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 OR5H5P-201ENST00000503164 928 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 GMPSP1-201ENST00000514075 579 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-488P-201ENST00000515918 99 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms