Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AC114781.5-201ENST00000615297 108 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL450472.3-201ENST00000615578 367 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AL731566.2-201ENST00000618971 317 ntBASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL4A3BPQ9Y5P4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-1042P-201ENST00000384204 107 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC011933.1-201ENST00000413334 321 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 RPL23AP38-201ENST00000423801 469 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AL132765.1-201ENST00000434165 553 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 PGBD4P3-201ENST00000440731 581 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC116533.1-201ENST00000459748 321 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC135721.1-201ENST00000497954 479 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC114967.1-201ENST00000504890 259 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 Y_RNA.655-201ENST00000515919 96 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC136624.4-201ENST00000573044 370 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC113403.1-201ENST00000604910 193 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC104073.3-201ENST00000610942 955 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AL355810.1-201ENST00000614629 552 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AL138721.1-201ENST00000616756 179 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 uc_338.13-201ENST00000618243 179 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 OR52H1-202ENST00000641796 1061 ntBASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC01355-201ENST00000566551 5444 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 FARSBP1-201ENST00000435808 1778 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR331-201ENST00000362302 94 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU6-1119P-201ENST00000384349 108 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AL109755.1-201ENST00000401791 649 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AL136372.1-201ENST00000403060 228 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 RNU2-62P-201ENST00000410868 191 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC090774.1-201ENST00000435925 246 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC073614.1-201ENST00000438690 650 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC010618.1-201ENST00000469924 477 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 STMN1P2-201ENST00000508435 439 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 NDUFB4P2-201ENST00000509515 391 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 FTH1P21-201ENST00000512179 511 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 FTH1P9-201ENST00000513251 355 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AL133153.1-201ENST00000557756 303 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR3939-201ENST00000582614 106 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR3138-201ENST00000585238 82 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 NRBF2P1-201ENST00000587407 859 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 HMGN1P30-201ENST00000589286 268 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 MIR6716-201ENST00000613413 80 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 AC138915.3-201ENST00000562908 1389 ntBASIC4.87□□□□□ -1.63
COL4A3BPQ9Y5P4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms