Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MTND3P25-201ENST00000509243 135 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-352P-201ENST00000516908 107 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 MIR5692A1-201ENST00000580523 69 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AC233702.7-202ENST00000582941 211 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AC006329.2-201ENST00000611491 394 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 AP001264.1-201ENST00000620602 703 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 GNL2P1-201ENST00000451274 2190 ntBASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB3Q9Y5E6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC011455.2-201ENST00000599320 3336 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 BIN2P1-201ENST00000504996 1530 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 Y_RNA.343-201ENST00000365354 112 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 Y_RNA.353-201ENST00000365440 108 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SNORD51-201ENST00000384320 80 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-937P-201ENST00000384325 106 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SNRPEP6-201ENST00000407465 277 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AL035461.1-201ENST00000421490 332 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC007679.3-201ENST00000434035 414 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 CYCSP43-201ENST00000438233 310 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 PIGFP3-201ENST00000441918 722 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RPL5P7-201ENST00000444235 813 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-1218P-201ENST00000458990 108 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC012123.2-201ENST00000485809 248 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC140059.1-201ENST00000489238 361 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC022133.1-201ENST00000490961 571 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 FKBP1BP1-201ENST00000553366 325 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AL138895.2-201ENST00000603019 178 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SNORA74.4-201ENST00000607595 199 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AL132640.3-201ENST00000630473 177 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RBBP8P1-201ENST00000449447 1844 ntBASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB3Q9Y5E6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 PANDAR-201ENST00000629595 1506 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-153P-201ENST00000364422 104 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 RNY3P4-201ENST00000384428 101 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 RNU6-131P-201ENST00000391144 107 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 BTF3P6-201ENST00000448054 499 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC006511.1-201ENST00000470614 315 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 GM2AP2-201ENST00000491764 562 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AP002453.1-201ENST00000492327 668 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 AC016065.2-201ENST00000514530 444 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 RNA5SP418-201ENST00000515951 117 ntBASIC6.16□□□□□ -1.42
PCDHB3Q9Y5E6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms