Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC109583.1-201ENST00000432156 268 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 PGBD4P3-201ENST00000440731 581 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 DPPA3P1-201ENST00000448050 469 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC092757.1-201ENST00000467293 467 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC069439.1-201ENST00000494739 167 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RPS4XP18-201ENST00000495480 763 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC046134.1-201ENST00000514454 666 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-488P-201ENST00000515918 99 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-507P-201ENST00000516045 100 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AP001893.2-201ENST00000526949 202 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 FGF7P1-201ENST00000582820 288 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC008687.2-201ENST00000597865 520 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL591034.3-201ENST00000605511 685 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC008945.2-201ENST00000606056 604 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 Z98200.1-201ENST00000607298 470 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 MIR8059-201ENST00000620427 81 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AC110994.2-201ENST00000635481 492 ntBASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.01□□□□□ -1.61
CTDP1Q9Y5B0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AL354685.2-201ENST00000448218 1447 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 SPRR2C-201ENST00000290702 219 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 Y_RNA.573-201ENST00000384763 105 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 CALM2P3-201ENST00000400429 449 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 RPL23AP48-201ENST00000406913 488 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 BX295541.1-201ENST00000417774 250 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AL358934.1-201ENST00000432346 324 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC010881.1-201ENST00000433830 235 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 RPS4XP4-201ENST00000443195 763 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MTND6P13-201ENST00000443510 523 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MTCO1P48-201ENST00000448024 1096 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MTCO1P27-201ENST00000448269 226 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 GAPDHP17-201ENST00000449858 1001 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 PPIAP3-201ENST00000450588 505 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 OR6K1P-201ENST00000456766 971 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 FAM172BP-201ENST00000487497 1089 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC008628.2-201ENST00000502605 298 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC009646.1-201ENST00000510455 318 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AL160290.3-201ENST00000604869 165 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC104260.1-201ENST00000616660 539 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC007546.2-201ENST00000623996 360 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AC112484.5-201ENST00000624189 228 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AP005264.7-201ENST00000625003 745 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 MTND4P12-201ENST00000498999 1377 ntBASIC5□□□□□ -1.61
CTDP1Q9Y5B0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5□□□□□ -1.61
CTDP1Q9Y5B0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 FARSBP1-201ENST00000435808 1778 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RNU6-777P-201ENST00000364265 104 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RNY4P34-201ENST00000364779 95 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL603766.1-201ENST00000407763 664 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RN7SKP177-201ENST00000410567 355 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RNU4-55P-201ENST00000410731 137 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 RNU2-41P-201ENST00000410991 178 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AC108032.1-201ENST00000416706 207 ntBASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CTDP1Q9Y5B0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms