Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 Y_RNA.367-201ENST00000365544 101 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RNU6-1105P-201ENST00000384774 107 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RNU6-907P-201ENST00000390924 102 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RNY4P36-201ENST00000391116 96 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RN7SKP267-201ENST00000410381 285 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC140479.3-201ENST00000418944 1126 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC092832.1-201ENST00000422934 400 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RPS27AP12-201ENST00000429552 465 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 OR4K11P-201ENST00000431829 904 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 MTND5P22-201ENST00000458380 195 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 VN1R17P-201ENST00000472048 1090 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC012181.1-201ENST00000479895 423 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC091885.1-201ENST00000506658 268 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC004062.1-201ENST00000509926 645 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 SUMO2P20-201ENST00000520803 283 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 RN7SL290P-201ENST00000578661 300 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 OR4K8P-201ENST00000578842 1048 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 XIAPP1-201ENST00000603162 600 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AL355816.1-201ENST00000607951 118 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 TLK1P1-201ENST00000456760 2440 ntBASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.08□□□□□ -1.44
RTCBQ9Y3I0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AP000756.2-201ENST00000624168 2567 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC067945.1-201ENST00000342609 618 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 Y_RNA.301-201ENST00000364990 103 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 Y_RNA.373-201ENST00000365600 103 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 SNORA22B-201ENST00000383876 138 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RNU1-82P-201ENST00000390851 165 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AL024474.1-201ENST00000404655 591 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 U3.32-201ENST00000408116 212 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RN7SKP235-201ENST00000410662 305 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 BX276092.6-201ENST00000430476 250 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RPL36P19-201ENST00000430744 301 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RPS17P8-201ENST00000434525 335 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 BX276092.8-201ENST00000455722 250 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RNU7-152P-201ENST00000458982 64 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RPL21P6-201ENST00000479171 504 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC007016.1-201ENST00000512110 244 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RPL7P20-201ENST00000520308 745 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC018630.1-201ENST00000541376 925 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC018552.3-201ENST00000567416 561 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 RPL23AP92-201ENST00000603609 255 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC019193.3-201ENST00000609144 554 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 OR6R2P-201ENST00000609216 300 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 uc_338.12-201ENST00000616344 181 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AL713922.2-201ENST00000619384 716 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AL161637.1-201ENST00000622380 412 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 CYP3A51P-201ENST00000633513 256 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 AC097063.1-201ENST00000426714 1797 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 SMG1P6-201ENST00000532337 2930 ntBASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RTCBQ9Y3I0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 AC004972.1-201ENST00000623934 2209 ntBASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTCBQ9Y3I0 RN7SKP145-201ENST00000363291 303 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms